viralzone.expasy.org

Fiersviridae ~ ViralZone

  • ️Philippe Le Mercier, Chantal Hulo, Patrick Masson (content); Edouard de Castro (software)

(formerly named Leviviridae)

VIRION

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Non-enveloped, spherical virion about 26 nm in diameter with T=3 icosahedral symmetry composed of 178 CP proteins and a single A maturation protein .
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GENOME

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Monopartite, linear, ssRNA(+) genome about 3.4-4.3 kb in size. The 5' end is a triphosphate. Encodes 3 (Allelovirus) or 4 proteins (Levivirus).

GENE EXPRESSION

The virion RNA is infectious and serves as both the genome and viral messenger RNA. Encodes 4 ORFs. Cp protein represses replicase translation by binding a RNA hairpin at the start site of this gene.
Lysis protein is expressed by suppression of termination of an UGA nonsense codon in Allolevivirus genus.

ENZYMES

REPLICATION

  1. Adsorption to F pili of target cells induces cleavage and release of the maturation protein.
  2. Genomic RNA enters the bacterium.
  3. Viral proteins are translated.
  4. Viral replicase assembles with host proteins (ribosomal protein S1, translation elongation factors EF-Tu and EF-Ts) to form the active RNA polymerase.
  5. Replication of genomic RNA into a minus strand, which serves as template to produce new positive strand genomes.
  6. Late in infection CP protein bind to a RNA hairpin on the genome, and new virus particles are assembled in the cytoplasm.
  7. Release by cell lysis.

Matching UniProtKB/Swiss-Prot entries

(all links/actions below point to uniprot.org website)

32 entries grouped by strain

4 entries

Enterobacteria phage GA (Bacteriophage GA) reference strain

4 entries

Enterobacteria phage SP (Bacteriophage SP) reference strain

4 entries

Escherichia phage MS2 (Bacteriophage MS2) reference strain

4 entries

Qbeta virus (strain MX1) reference strain

2 entries

Pseudomonas phage PP7 (Bacteriophage PP7) reference strain

4 entries

Enterobacteria phage fr (Bacteriophage fr)

4 entries

Escherichia virus Qbeta (Bacteriophage Q-beta)

2 entries

Enterobacteria phage JP34 (Bacteriophage JP34)

1 entry

Enterobacteria phage R17 (Bacteriophage R17)

1 entry

Enterobacteria phage ZR (Bacteriophage ZR)

1 entry

Enterobacteria phage f2 (Bacteriophage f2)

1 entry

Pseudomonas phage PRR1 (Bacteriophage PRR1)