bio-formats.readthedocs.io

Summary of supported metadata fields — Bio-Formats 8.1.1 documentation

Arc - ID

0

0

0

181

Arc - LotNumber

1

0

0

180

Arc - Manufacturer

1

0

0

180

Arc - Model

1

0

0

180

Arc - Power

1

0

0

180

Arc - SerialNumber

1

0

0

180

Arc - Type

0

0

0

181

BooleanAnnotation - AnnotationRef

0

0

0

181

BooleanAnnotation - Description

0

0

0

181

BooleanAnnotation - ID

1

0

0

180

BooleanAnnotation - Namespace

1

0

0

180

BooleanAnnotation - Value

1

0

0

180

Channel - AcquisitionMode

5

0

0

176

Channel - AnnotationRef

0

0

0

181

Channel - Color

20

0

0

161

Channel - ContrastMethod

1

0

0

180

Channel - EmissionWavelength

25

0

0

156

Channel - ExcitationWavelength

22

0

0

159

Channel - FilterSetRef

1

0

0

180

Channel - Fluor

3

0

0

178

Channel - ID

181

0

0

0

Channel - IlluminationType

3

0

0

178

Channel - LightSourceSettingsAttenuation

1

0

0

180

Channel - LightSourceSettingsID

7

0

0

174

Channel - LightSourceSettingsWavelength

2

0

0

179

Channel - NDFilter

2

0

0

179

Channel - Name

49

0

0

132

Channel - PinholeSize

11

0

0

170

Channel - PockelCellSetting

0

0

0

181

Channel - SamplesPerPixel

181

0

0

0

CommentAnnotation - AnnotationRef

0

0

0

181

CommentAnnotation - Description

0

0

0

181

CommentAnnotation - ID

1

0

0

180

CommentAnnotation - Namespace

1

0

0

180

CommentAnnotation - Value

1

0

0

180

Dataset - AnnotationRef

0

0

0

181

Dataset - Description

0

0

0

181

Dataset - ExperimenterGroupRef

0

0

0

181

Dataset - ExperimenterRef

0

0

0

181

Dataset - ID

0

0

0

181

Dataset - ImageRef

0

0

0

181

Dataset - Name

0

0

0

181

Detector - AmplificationGain

2

0

0

179

Detector - AnnotationRef

0

0

0

181

Detector - Gain

7

0

0

174

Detector - ID

37

0

0

144

Detector - LotNumber

1

0

0

180

Detector - Manufacturer

5

0

0

176

Detector - Model

15

0

0

166

Detector - Offset

7

0

0

174

Detector - SerialNumber

4

0

0

177

Detector - Type

28

0

0

153

Detector - Voltage

3

0

0

178

Detector - Zoom

4

0

0

177

DetectorSettings - Binning

19

0

0

162

DetectorSettings - Gain

21

0

0

160

DetectorSettings - ID

35

0

0

146

DetectorSettings - Offset

9

0

0

172

DetectorSettings - ReadOutRate

5

0

0

176

DetectorSettings - Voltage

6

0

0

175

Dichroic - AnnotationRef

0

0

0

181

Dichroic - ID

6

0

0

175

Dichroic - LotNumber

1

0

0

180

Dichroic - Manufacturer

1

0

0

180

Dichroic - Model

6

0

0

175

Dichroic - SerialNumber

1

0

0

180

DoubleAnnotation - AnnotationRef

0

0

0

181

DoubleAnnotation - Description

0

0

0

181

DoubleAnnotation - ID

1

0

0

180

DoubleAnnotation - Namespace

1

0

0

180

DoubleAnnotation - Value

1

0

0

180

Ellipse - FillColor

0

0

0

181

Ellipse - FillRule

0

0

0

181

Ellipse - FontFamily

0

0

0

181

Ellipse - FontSize

3

0

0

178

Ellipse - FontStyle

0

0

0

181

Ellipse - ID

7

0

0

174

Ellipse - Locked

0

0

0

181

Ellipse - RadiusX

7

0

0

174

Ellipse - RadiusY

7

0

0

174

Ellipse - StrokeColor

1

0

0

180

Ellipse - StrokeDashArray

0

0

0

181

Ellipse - StrokeWidth

2

0

0

179

Ellipse - Text

4

0

0

177

Ellipse - TheC

0

0

0

181

Ellipse - TheT

2

0

0

179

Ellipse - TheZ

2

0

0

179

Ellipse - Transform

2

0

0

179

Ellipse - X

7

0

0

174

Ellipse - Y

7

0

0

174

Experiment - AnnotationRef

0

0

0

181

Experiment - Description

1

0

0

180

Experiment - ExperimenterRef

0

0

0

181

Experiment - ID

5

0

0

176

Experiment - Type

5

0

0

176

Experimenter - AnnotationRef

0

0

0

181

Experimenter - Email

2

0

0

179

Experimenter - FirstName

5

0

0

176

Experimenter - ID

12

0

0

169

Experimenter - Institution

4

0

0

177

Experimenter - LastName

9

0

0

172

Experimenter - MiddleName

1

0

0

180

Experimenter - UserName

4

0

0

177

ExperimenterGroup - AnnotationRef

0

0

0

181

ExperimenterGroup - Description

0

0

0

181

ExperimenterGroup - ExperimenterRef

0

0

0

181

ExperimenterGroup - ID

0

0

0

181

ExperimenterGroup - Leader

0

0

0

181

ExperimenterGroup - Name

0

0

0

181

Filament - ID

0

0

0

181

Filament - LotNumber

1

0

0

180

Filament - Manufacturer

1

0

0

180

Filament - Model

1

0

0

180

Filament - Power

1

0

0

180

Filament - SerialNumber

1

0

0

180

Filament - Type

0

0

0

181

FileAnnotation - AnnotationRef

0

0

0

181

FileAnnotation - Description

0

0

0

181

FileAnnotation - ID

0

0

0

181

FileAnnotation - Namespace

0

0

0

181

Filter - AnnotationRef

0

0

0

181

Filter - FilterWheel

2

0

0

179

Filter - ID

8

0

0

173

Filter - LotNumber

1

0

0

180

Filter - Manufacturer

1

0

0

180

Filter - Model

8

0

0

173

Filter - SerialNumber

1

0

0

180

Filter - Type

2

0

0

179

FilterSet - DichroicRef

2

0

0

179

FilterSet - EmissionFilterRef

2

0

0

179

FilterSet - ExcitationFilterRef

2

0

0

179

FilterSet - ID

2

0

0

179

FilterSet - LotNumber

1

0

0

180

FilterSet - Manufacturer

1

0

0

180

FilterSet - Model

2

0

0

179

FilterSet - SerialNumber

1

0

0

180

Folder - AnnotationRef

0

0

0

181

Folder - Description

0

0

0

181

Folder - FolderRef

0

0

0

181

Folder - ID

0

0

0

181

Folder - ImageRef

0

0

0

181

Folder - Name

0

0

0

181

Folder - ROIRef

0

0

0

181

Image - AcquisitionDate

181

0

0

0

Image - AnnotationRef

1

0

0

180

Image - Description

48

0

0

133

Image - ExperimentRef

2

0

0

179

Image - ExperimenterGroupRef

0

0

0

181

Image - ExperimenterRef

7

0

0

174

Image - ID

181

0

0

0

Image - InstrumentRef

52

0

0

129

Image - MicrobeamManipulationRef

0

0

0

181

Image - Name

181

0

0

0

Image - ROIRef

16

0

0

165

ImagingEnvironment - AirPressure

1

0

0

180

ImagingEnvironment - CO2Percent

1

0

0

180

ImagingEnvironment - Humidity

1

0

0

180

ImagingEnvironment - Temperature

10

0

0

171

Instrument - AnnotationRef

0

0

0

181

Instrument - ID

58

0

0

123

Label - FillColor

0

0

0

181

Label - FillRule

0

0

0

181

Label - FontFamily

0

0

0

181

Label - FontSize

3

0

0

178

Label - FontStyle

0

0

0

181

Label - ID

6

0

0

175

Label - Locked

0

0

0

181

Label - StrokeColor

1

0

0

180

Label - StrokeDashArray

0

0

0

181

Label - StrokeWidth

2

0

0

179

Label - Text

6

0

0

175

Label - TheC

0

0

0

181

Label - TheT

0

0

0

181

Label - TheZ

0

0

0

181

Label - Transform

0

0

0

181

Label - X

6

0

0

175

Label - Y

6

0

0

175

Laser - FrequencyMultiplication

0

0

0

181

Laser - ID

11

0

0

170

Laser - LaserMedium

8

0

0

173

Laser - LotNumber

1

0

0

180

Laser - Manufacturer

2

0

0

179

Laser - Model

5

0

0

176

Laser - PockelCell

0

0

0

181

Laser - Power

4

0

0

177

Laser - Pulse

0

0

0

181

Laser - Pump

0

0

0

181

Laser - RepetitionRate

1

0

0

180

Laser - SerialNumber

1

0

0

180

Laser - Tuneable

0

0

0

181

Laser - Type

8

0

0

173

Laser - Wavelength

9

0

0

172

LightEmittingDiode - ID

0

0

0

181

LightEmittingDiode - LotNumber

1

0

0

180

LightEmittingDiode - Manufacturer

1

0

0

180

LightEmittingDiode - Model

1

0

0

180

LightEmittingDiode - Power

1

0

0

180

LightEmittingDiode - SerialNumber

1

0

0

180

LightPath - AnnotationRef

0

0

0

181

LightPath - DichroicRef

3

0

0

178

LightPath - EmissionFilterRef

5

0

0

176

LightPath - ExcitationFilterRef

1

0

0

180

Line - FillColor

0

0

0

181

Line - FillRule

0

0

0

181

Line - FontFamily

0

0

0

181

Line - FontSize

3

0

0

178

Line - FontStyle

0

0

0

181

Line - ID

7

0

0

174

Line - Locked

0

0

0

181

Line - MarkerEnd

0

0

0

181

Line - MarkerStart

0

0

0

181

Line - StrokeColor

1

0

0

180

Line - StrokeDashArray

0

0

0

181

Line - StrokeWidth

2

0

0

179

Line - Text

3

0

0

178

Line - TheC

0

0

0

181

Line - TheT

1

0

0

180

Line - TheZ

1

0

0

180

Line - Transform

1

0

0

180

Line - X1

7

0

0

174

Line - X2

7

0

0

174

Line - Y1

7

0

0

174

Line - Y2

7

0

0

174

ListAnnotation - AnnotationRef

0

0

0

181

ListAnnotation - Description

0

0

0

181

ListAnnotation - ID

0

0

0

181

ListAnnotation - Namespace

0

0

0

181

LongAnnotation - AnnotationRef

0

0

0

181

LongAnnotation - Description

0

0

0

181

LongAnnotation - ID

1

0

0

180

LongAnnotation - Namespace

1

0

0

180

LongAnnotation - Value

1

0

0

180

Mask - BinData

3

0

0

178

Mask - BinDataBigEndian

1

0

0

180

Mask - BinDataBigLength

0

0

0

181

Mask - BinDataCompression

0

0

0

181

Mask - FillColor

1

0

0

180

Mask - FillRule

0

0

0

181

Mask - FontFamily

0

0

0

181

Mask - FontSize

0

0

0

181

Mask - Height

3

0

0

178

Mask - ID

3

0

0

178

Mask - Locked

0

0

0

181

Mask - StrokeColor

1

0

0

180

Mask - StrokeDashArray

0

0

0

181

Mask - StrokeWidth

0

0

0

181

Mask - Text

0

0

0

181

Mask - TheC

0

0

0

181

Mask - TheT

0

0

0

181

Mask - TheZ

0

0

0

181

Mask - Transform

0

0

0

181

Mask - Width

3

0

0

178

Mask - X

3

0

0

178

Mask - Y

3

0

0

178

MicrobeamManipulation - ExperimenterRef

0

0

0

181

MicrobeamManipulation - ID

0

0

0

181

MicrobeamManipulation - ROIRef

0

0

0

181

MicrobeamManipulation - Type

0

0

0

181

MicrobeamManipulationLightSourceSettings - Attenuation

0

0

0

181

MicrobeamManipulationLightSourceSettings - ID

0

0

0

181

MicrobeamManipulationLightSourceSettings - Wavelength

0

0

0

181

Microscope - LotNumber

1

0

0

180

Microscope - Manufacturer

2

0

0

179

Microscope - Model

13

0

0

168

Microscope - SerialNumber

4

0

0

177

Microscope - Type

3

0

0

178

Objective - AnnotationRef

0

0

0

181

Objective - CalibratedMagnification

8

0

0

173

Objective - Correction

27

0

0

154

Objective - ID

43

0

0

138

Objective - Immersion

29

0

0

152

Objective - Iris

2

0

0

179

Objective - LensNA

24

0

0

157

Objective - LotNumber

1

0

0

180

Objective - Manufacturer

6

0

0

175

Objective - Model

17

0

0

164

Objective - NominalMagnification

35

0

0

146

Objective - SerialNumber

3

0

0

178

Objective - WorkingDistance

12

0

0

169

ObjectiveSettings - CorrectionCollar

1

0

0

180

ObjectiveSettings - ID

38

0

0

143

ObjectiveSettings - Medium

1

0

0

180

ObjectiveSettings - RefractiveIndex

10

0

0

171

Pixels - AnnotationRef

0

0

0

181

Pixels - BigEndian

181

0

0

0

Pixels - DimensionOrder

181

0

0

0

Pixels - ID

181

0

0

0

Pixels - Interleaved

181

0

0

0

Pixels - PhysicalSizeX

96

0

0

85

Pixels - PhysicalSizeY

96

0

0

85

Pixels - PhysicalSizeZ

49

0

0

132

Pixels - SignificantBits

181

0

0

0

Pixels - SizeC

181

0

0

0

Pixels - SizeT

181

0

0

0

Pixels - SizeX

181

0

0

0

Pixels - SizeY

181

0

0

0

Pixels - SizeZ

181

0

0

0

Pixels - TimeIncrement

17

0

0

164

Pixels - Type

181

0

0

0

Plane - AnnotationRef

0

0

0

181

Plane - DeltaT

30

0

0

151

Plane - ExposureTime

39

0

0

142

Plane - HashSHA1

0

0

0

181

Plane - PositionX

40

0

0

141

Plane - PositionY

40

0

0

141

Plane - PositionZ

33

0

0

148

Plane - TheC

181

0

0

0

Plane - TheT

181

0

0

0

Plane - TheZ

181

0

0

0

Plate - AnnotationRef

0

0

0

181

Plate - ColumnNamingConvention

8

0

0

173

Plate - Columns

15

0

0

166

Plate - Description

3

0

0

178

Plate - ExternalIdentifier

4

0

0

177

Plate - ID

15

0

0

166

Plate - Name

13

0

0

168

Plate - RowNamingConvention

8

0

0

173

Plate - Rows

15

0

0

166

Plate - Status

0

0

0

181

Plate - WellOriginX

1

0

0

180

Plate - WellOriginY

1

0

0

180

PlateAcquisition - AnnotationRef

0

0

0

181

PlateAcquisition - Description

0

0

0

181

PlateAcquisition - EndTime

3

0

0

178

PlateAcquisition - ID

11

0

0

170

PlateAcquisition - MaximumFieldCount

10

0

0

171

PlateAcquisition - Name

0

0

0

181

PlateAcquisition - StartTime

5

0

0

176

PlateAcquisition - WellSampleRef

11

0

0

170

Point - FillColor

0

0

0

181

Point - FillRule

0

0

0

181

Point - FontFamily

0

0

0

181

Point - FontSize

1

0

0

180

Point - FontStyle

0

0

0

181

Point - ID

5

0

0

176

Point - Locked

0

0

0

181

Point - StrokeColor

1

0

0

180

Point - StrokeDashArray

1

0

0

180

Point - StrokeWidth

2

0

0

179

Point - Text

1

0

0

180

Point - TheC

0

0

0

181

Point - TheT

1

0

0

180

Point - TheZ

2

0

0

179

Point - Transform

0

0

0

181

Point - X

5

0

0

176

Point - Y

5

0

0

176

Polygon - FillColor

0

0

0

181

Polygon - FillRule

0

0

0

181

Polygon - FontFamily

0

0

0

181

Polygon - FontSize

2

0

0

179

Polygon - FontStyle

0

0

0

181

Polygon - ID

8

0

0

173

Polygon - Locked

0

0

0

181

Polygon - Points

8

0

0

173

Polygon - StrokeColor

1

0

0

180

Polygon - StrokeDashArray

1

0

0

180

Polygon - StrokeWidth

3

0

0

178

Polygon - Text

2

0

0

179

Polygon - TheC

0

0

0

181

Polygon - TheT

1

0

0

180

Polygon - TheZ

2

0

0

179

Polygon - Transform

1

0

0

180

Polyline - FillColor

0

0

0

181

Polyline - FillRule

0

0

0

181

Polyline - FontFamily

0

0

0

181

Polyline - FontSize

2

0

0

179

Polyline - FontStyle

0

0

0

181

Polyline - ID

6

0

0

175

Polyline - Locked

0

0

0

181

Polyline - MarkerEnd

0

0

0

181

Polyline - MarkerStart

0

0

0

181

Polyline - Points

6

0

0

175

Polyline - StrokeColor

1

0

0

180

Polyline - StrokeDashArray

1

0

0

180

Polyline - StrokeWidth

3

0

0

178

Polyline - Text

2

0

0

179

Polyline - TheC

0

0

0

181

Polyline - TheT

1

0

0

180

Polyline - TheZ

2

0

0

179

Polyline - Transform

1

0

0

180

Project - AnnotationRef

0

0

0

181

Project - DatasetRef

0

0

0

181

Project - Description

0

0

0

181

Project - ExperimenterGroupRef

0

0

0

181

Project - ExperimenterRef

0

0

0

181

Project - ID

0

0

0

181

Project - Name

0

0

0

181

ROI - AnnotationRef

0

0

0

181

ROI - Description

1

0

0

180

ROI - ID

16

0

0

165

ROI - Name

5

0

0

176

Reagent - AnnotationRef

0

0

0

181

Reagent - Description

0

0

0

181

Reagent - ID

0

0

0

181

Reagent - Name

0

0

0

181

Reagent - ReagentIdentifier

0

0

0

181

Rectangle - FillColor

0

0

0

181

Rectangle - FillRule

0

0

0

181

Rectangle - FontFamily

0

0

0

181

Rectangle - FontSize

3

0

0

178

Rectangle - FontStyle

0

0

0

181

Rectangle - Height

12

0

0

169

Rectangle - ID

12

0

0

169

Rectangle - Locked

0

0

0

181

Rectangle - StrokeColor

3

0

0

178

Rectangle - StrokeDashArray

0

0

0

181

Rectangle - StrokeWidth

2

0

0

179

Rectangle - Text

5

0

0

176

Rectangle - TheC

2

0

0

179

Rectangle - TheT

3

0

0

178

Rectangle - TheZ

3

0

0

178

Rectangle - Transform

1

0

0

180

Rectangle - Width

12

0

0

169

Rectangle - X

12

0

0

169

Rectangle - Y

12

0

0

169

Screen - AnnotationRef

0

0

0

181

Screen - Description

0

0

0

181

Screen - ID

1

0

0

180

Screen - Name

1

0

0

180

Screen - PlateRef

0

0

0

181

Screen - ProtocolDescription

0

0

0

181

Screen - ProtocolIdentifier

0

0

0

181

Screen - ReagentSetDescription

0

0

0

181

Screen - ReagentSetIdentifier

0

0

0

181

Screen - Type

0

0

0

181

StageLabel - Name

3

0

0

178

StageLabel - X

2

0

0

179

StageLabel - Y

2

0

0

179

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