Genome-wide meta-analyses identify multiple loci associated with smoking behavior - Nature Genetics
- ️Sun Apr 25 2010
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Acknowledgements
This work was funded by the University of North Carolina Lineberger Comprehensive Cancer Center University Cancer Research Fund Award and by US National Cancer Institute K07 CA118412 to H.F. Statistical analyses were carried out on the Genetic Cluster Computer (see URLs), which is supported by the Netherlands Scientific Organization (NWO 480-05-003). Acknowledgments for studies included in TAG are listed in the Supplementary Note.
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Authors and Affiliations
Department of Genetics, University of North Carolina, Chapel Hill, North Carolina, USA
Helena Furberg, YunJung Kim, Jennifer Dackor, Karen L Mohlke & Patrick F Sullivan
University of North Carolina Lineberger Comprehensive Cancer Center, University of North Carolina, Chapel Hill, North Carolina, USA
Helena Furberg, Karen L Mohlke & Patrick F Sullivan
Human Genetics Center and Institute for Molecular Medicine, University of Texas Health Science Center, Houston, Texas, USA
Eric Boerwinkle
Department of Epidemiology, University of North Carolina, Chapel Hill, North Carolina, USA
Nora Franceschini
Division of Cardiology, Azienda Ospedaliero-Universitaria di Parma, Parma, Italy
Diego Ardissino
Statistical Laboratory, Centre for Mathematical Sciences, University of Cambridge, Cambridge, UK
Luisa Bernardinelli
Department of Applied Health Sciences, University of Pavia, Pavia, Italy
Luisa Bernardinelli
Department of Internal Medicine and Medical Specialties, Fondazione Istituto di Ricovero e Cura a Carattere Scientifico, Ospedale Maggiore, Mangiagalli e Regina Elena, University of Milan, Milan, Italy
Pier M Mannucci
Department of Cardiology, Azienda Ospedaliera Niguarda Ca' Granda, Milan, Italy
Francesco Mauri & Piera A Merlini
HudsonAlpha Institute for Biotechnology, Huntsville, Alabama, USA
Devin Absher
Cardiovascular Medicine, Stanford University, Stanford, California, USA
Themistocles L Assimes, Joshua W Knowles & Thomas Quertermous
Stanford Prevention Research Center, Stanford University, Stanford, California, USA
Stephen P Fortmann
Kaiser Permanente Northern California Division of Research, Oakland, California, USA
Carlos Iribarren
National Institute on Aging, Baltimore, Maryland, USA
Luigi Ferrucci
Medstart Research Institute, National Institute on Aging, Baltimore, Maryland, USA
Toshiko Tanaka
Cardiovascular Health Research Unit, University of Washington, Seattle, Washington, USA
Joshua C Bis, Barbara McKnight, Bruce M Psaty, Evan L Thacker & Stephen M Schwartz
Department of Medicine, University of Washington, Seattle, Washington, USA
Joshua C Bis & Bruce M Psaty
Division of Public Health Sciences, Wake Forest University Health Sciences, Winston-Salem, North Carolina, USA
Curt D Furberg
Medical Genetics Institute, Cedars-Sinai Medical Center, Los Angeles, California, USA
Talin Haritunians & Kent D Taylor
Department of Biostatistics, University of Washington, Seattle, Washington, USA
Barbara McKnight
Department of Epidemiology and Health Services, University of Washington, Seattle, Washington, USA
Bruce M Psaty
Group Health Research Institute, Seattle, Washington, USA
Bruce M Psaty
Department of Epidemiology, University of Washington, Seattle, Washington, USA
Evan L Thacker
Department of Clinical Sciences, Diabetes and Endocrinology Unit, Lund University, Malmö, Sweden
Peter Almgren, Leif Groop & Claes Ladenvall
Department of Biostatistics, School of Public Health, University of Michigan, Ann Arbor, Michigan, USA
Michael Boehnke, Anne U Jackson & Heather M Stringham
Department of Public Health, Hjelt Institute, University of Helsinki, Helsinki, Finland
Jaakko Tuomilehto & Jaakko Kaprio
Diabetes Prevention Unit, National Institute for Health and Welfare, Helsinki, Finland
Jaakko Tuomilehto
Finland South Ostrobothnia Central Hospital, Seinäjoki, Finland
Jaakko Tuomilehto
Boston University School of Medicine, Boston, Massachusetts, USA
Emelia J Benjamin & Ramachandran S Vasan
Boston University School of Public Health, Boston, Massachusetts, USA
Emelia J Benjamin
Center for Population Studies, National Heart, Lung, and Blood Institute, Bethesda, Maryland, USA
Shih-Jen Hwang & Sarah Rosner Preis
Department of Medicine, Sections of Preventive Medicine and Cardiology, Boston University School of Medicine, Boston, Massachusetts, USA
Daniel Levy & Ramachandran S Vasan
Center for Psychiatric Genetics, NorthShore University HealthSystem Research Institute, Evanston, Illinois, USA
Jubao Duan, Pablo V Gejman & Alan R Sanders
Department of Psychiatry and Behavioral Sciences, Stanford University, Stanford, California, USA
Douglas F Levinson
Division of Cancer Epidemiology and Genetics, Biostatistics Branch, National Cancer Institute, Bethesda, Maryland, USA
Jianxin Shi
International Agency for Research on Cancer (IARC), Lyon, France
Esther H Lips, James D McKay & Paul Brennan
Institut Català d'Oncologia, Barcelona, Spain
Antonio Agudo & Xavier Castellsagué
General Hospital, Pordenone, Italy
Luigi Barzan
Institute of Hygiene and Epidemiology, First Faculty of Medicine, Charles University, Prague, Czech Republic
Vladimir Bencko & Ivana Holcátová
Institut National de la santé et de la Recherche Medicalé (INSERM) U794, Paris, France
Simone Benhamou
Institut Gustave Roussy, Villejuif, France
Simone Benhamou
Department of Environmental Medicine and Public Health, University of Padua, Padua, Italy
Cristina Canova
University of Glasgow Medical Faculty Dental School, Glasgow, UK
David I Conway
Specialized Institute of Hygiene and Epidemiology, Banska Bystrica, Slovakia
Eleonora Fabianova
Department of Cancer Epidemiology and Genetics, Masaryk Memorial Cancer Institute, Brno, Czech Republic
Lenka Foretova
Palacky University, Olomouc, Czech Republic
Vladimir Janout
Trinity College School of Dental Science, Dublin, Ireland
Claire M Healy
Cancer Registry of Norway, Oslo, Norway
Kristina Kjaerheim
University of Athens School of Medicine, Athens, Greece
Pagona Lagiou
Department of Cancer Epidemiology and Prevention, Maria Sklodowska-Curie Cancer Center and Institute of Oncology, Warsaw, Poland
Jolanta Lissowska
University of Newcastle Dental School, Newcastle, UK
Ray Lowry
University of Aberdeen School of Medicine, Aberdeen, UK
Tatiana V Macfarlane
Institute of Public Health, Bucharest, Romania
Dana Mates
Center for Experimental Research and Medical Studies, University of Turin, Turin, Italy
Lorenzo Richiardi
National Institute of Environmental Health, Budapest, Hungary
Peter Rudnai
Department of Epidemiology, Institute of Occupational Medicine, Lodz, Poland
Neonilia Szeszenia-Dabrowska
Institute of Carcinogenesis, Cancer Research Centre, Moscow, Russia
David Zaridze
Croatian National Cancer Registry, Zagreb, Croatia
Ariana Znaor
Centre National de Genotypage, Institut Genomique, Comissariat à l'énergie Atomique, Evry, France
Mark Lathrop
Fondation Jean Dausset-Centre d'Étude du Polymorphisme Humain (CEPH), Paris, France
Mark Lathrop
Geriatric Unit, Azienda Sanitaria di Firenze, Florence, Italy
Stefania Bandinelli
Genetics of Complex Traits, Peninsula Medical School, The University of Exeter, Exeter, UK
Timothy M Frayling & John R B Perry
Laboratory of Epidemiology, Demography and Biometry, National Institute on Aging, Bethesda, Maryland, USA
Jack M Guralnik
Tuscany Health Regional Agency, Florence, Italy
Yuri Milaneschi
Broad Institute of Harvard and Massachusetts Institute of Technology, Cambridge, Massachusetts, USA
David Altshuler & Sek Kathiresan
Department of Molecular Biology, Massachusetts General Hospital, Boston, Massachusetts, USA
David Altshuler
Diabetes Unit, Massachusetts General Hospital, Boston, Massachusetts, USA
David Altshuler
Center for Human Genetics Research, Massachusetts General Hospital, Boston, Massachusetts, USA
David Altshuler & Sek Kathiresan
Department of Genetics, Harvard Medical School, Boston, Massachusetts, USA
David Altshuler
Department of Medicine, Harvard Medical School, Boston, Massachusetts, USA
David Altshuler
Cardiovascular Epidemiology and Genetics, Institut Municipal d'Investigacio Medica, Barcelona, Spain
Roberto Elosua & Gavin Lucas
Harvard Medical School, Boston, Massachusetts, USA
Sek Kathiresan
Department of Clinical Sciences, Hypertension and Cardiovascular Diseases, University Hospital Malmö, Lund University, Malmö, Sweden
Olle Melander
National Heart, Lung, and Blood Institute's Framingham Heart Study, Framingham, Massachusetts, USA
Christopher J O'Donnell
National Institute for Health and Welfare (THL), Helsinki, Finland
Veikko Salomaa & Jaakko Kaprio
Program in Medical and Population Genetics, Broad Institute of Harvard and Massachusetts Institute of Technology, Cambridge, Massachusetts, USA
Benjamin F Voight
EMGO Institute, Vrije Universiteit (VU) Medical Center, Amsterdam, The Netherlands
Brenda W Penninx, Johannes H Smit & Nicole Vogelzangs
Department of Psychiatry, VU University Medical Center, Amsterdam, The Netherlands
Brenda W Penninx, Johannes H Smit & Nicole Vogelzangs
Biological Psychology, VU University Amsterdam, Amsterdam, The Netherlands
Dorret I Boomsma, Eco J C de Geus, Jacqueline M Vink & Gonneke Willemsen
Division of Cancer Epidemiology and Genetics, National Cancer Institute, Bethesda, Maryland, USA
Stephen J Chanock
Department of Epidemiology, Program in Molecular and Genetic Epidemiology, Harvard University, Boston, Massachusetts, USA
Fangyi Gu, David J Hunter & Peter Kraft
Department of Medicine, Channing Laboratory, Brigham and Women's Hospital and Harvard Medical School, Boston, Massachusetts, USA
Susan E Hankinson
Department of Epidemiology, Erasmus Medical Center, Member of the Netherlands Consortium on Healthy Aging, Rotterdam, The Netherlands
Albert Hofman, Henning Tiemeier, Andre G Uitterlinden, Cornelia M van Duijn & Stefan Walter
Department of Child and Adolescent Psychiatry, Erasmus Medical Center, Rotterdam, The Netherlands
Henning Tiemeier
Department of Internal Medicine, Erasmus Medical Center, Rotterdam, The Netherlands
Andre G Uitterlinden
Centre for Medical Systems Biology, Erasmus Medical Center, Rotterdam, The Netherlands
Cornelia M van Duijn
Department of Public Health, Erasmus Medical Center, Rotterdam, The Netherlands
Stefan Walter
Division of Preventive Medicine, Department of Medicine, Brigham and Women's Hospital, Harvard Medical School, Boston, Massachusetts, USA
Daniel I Chasman, Brendan M Everett, Guillaume Paré & Paul M Ridker
Division of Cardiovascular Medicine, Department of Medicine, Brigham and Women's Hospital, Harvard Medical School, Boston, Massachusetts, USA
Brendan M Everett & Paul M Ridker
Department of Psychiatry and Neurobehavioural Sciences, University of Virginia, Charlottesville, Virginia, USA
Ming D Li
Virginia Institute for Psychiatric and Behavioral Genetics, Virginia Commonwealth University, Richmond, Virginia, USA
Hermine H Maes
Massey Cancer Center, Virginia Commonwealth University, Richmond, Virginia, USA
Hermine H Maes
Department of Psychiatry, University of Pennsylvania, Philadelphia, Pennsylvania, USA
Janet Audrain-McGovern & Caryn Lerman
Department of Functional Genomics, VU Amsterdam, Amsterdam, The Netherlands
Danielle Posthuma
Department of Medical Genomics, VU University Medical Center Amsterdam, Amsterdam, The Netherlands
Danielle Posthuma
Department of Psychiatry, University of North Carolina, Chapel Hill, North Carolina, USA
Laura M Thornton
Abramson Cancer Center, University of Pennsylvania, Philadelphia, Pennsylvania, USA
Caryn Lerman
Institute for Molecular Medicine, University of Helsinki, Helsinki, Finland
Jaakko Kaprio
Department of Psychiatry and Behavioral Sciences, Duke University Medical Center, Durham, North Carolina, USA
Jed E Rose
Department of Hygiene and Epidemiology, University of Ioannina School of Medicine, Ioannina, Greece
John P A Ioannidis
Tufts Clinical and Translational Science Institute, Tufts University School of Medicine, Boston, Massachusetts, USA
John P A Ioannidis
Center for Genetic Epidemiology and Modeling, Institute for Clinical Research and Health Policy Studies, Tufts Medical Center, Boston, Massachusetts, USA
John P A Ioannidis
Department of Biostatistics, University of North Carolina, Chapel Hill, North Carolina, USA
Dan-Yu Lin
Consortia
The Tobacco and Genetics Consortium
- Helena Furberg
- , YunJung Kim
- , Jennifer Dackor
- , Eric Boerwinkle
- , Nora Franceschini
- , Diego Ardissino
- , Luisa Bernardinelli
- , Pier M Mannucci
- , Francesco Mauri
- , Piera A Merlini
- , Devin Absher
- , Themistocles L Assimes
- , Stephen P Fortmann
- , Carlos Iribarren
- , Joshua W Knowles
- , Thomas Quertermous
- , Luigi Ferrucci
- , Toshiko Tanaka
- , Joshua C Bis
- , Curt D Furberg
- , Talin Haritunians
- , Barbara McKnight
- , Bruce M Psaty
- , Kent D Taylor
- , Evan L Thacker
- , Peter Almgren
- , Leif Groop
- , Claes Ladenvall
- , Michael Boehnke
- , Anne U Jackson
- , Karen L Mohlke
- , Heather M Stringham
- , Jaakko Tuomilehto
- , Emelia J Benjamin
- , Shih-Jen Hwang
- , Daniel Levy
- , Sarah Rosner Preis
- , Ramachandran S Vasan
- , Jubao Duan
- , Pablo V Gejman
- , Douglas F Levinson
- , Alan R Sanders
- , Jianxin Shi
- , Esther H Lips
- , James D McKay
- , Antonio Agudo
- , Luigi Barzan
- , Vladimir Bencko
- , Simone Benhamou
- , Xavier Castellsagué
- , Cristina Canova
- , David I Conway
- , Eleonora Fabianova
- , Lenka Foretova
- , Vladimir Janout
- , Claire M Healy
- , Ivana Holcátová
- , Kristina Kjaerheim
- , Pagona Lagiou
- , Jolanta Lissowska
- , Ray Lowry
- , Tatiana V Macfarlane
- , Dana Mates
- , Lorenzo Richiardi
- , Peter Rudnai
- , Neonilia Szeszenia-Dabrowska
- , David Zaridze
- , Ariana Znaor
- , Mark Lathrop
- , Paul Brennan
- , Stefania Bandinelli
- , Timothy M Frayling
- , Jack M Guralnik
- , Yuri Milaneschi
- , John R B Perry
- , David Altshuler
- , Roberto Elosua
- , Sek Kathiresan
- , Gavin Lucas
- , Olle Melander
- , Christopher J O'Donnell
- , Veikko Salomaa
- , Stephen M Schwartz
- , Benjamin F Voight
- , Brenda W Penninx
- , Johannes H Smit
- , Nicole Vogelzangs
- , Dorret I Boomsma
- , Eco J C de Geus
- , Jacqueline M Vink
- , Gonneke Willemsen
- , Stephen J Chanock
- , Fangyi Gu
- , Susan E Hankinson
- , David J Hunter
- , Albert Hofman
- , Henning Tiemeier
- , Andre G Uitterlinden
- , Cornelia M van Duijn
- , Stefan Walter
- , Daniel I Chasman
- , Brendan M Everett
- , Guillaume Paré
- , Paul M Ridker
- , Ming D Li
- , Hermine H Maes
- , Janet Audrain-McGovern
- , Danielle Posthuma
- , Laura M Thornton
- , Caryn Lerman
- , Jaakko Kaprio
- , Jed E Rose
- , John P A Ioannidis
- , Peter Kraft
- , Dan-Yu Lin
- & Patrick F Sullivan
Contributions
TAG: study conception, design, management: H.F., P.F.S., Y.K., J. Dackor; TAG Statistical Working Group: D.-Y.L., P.K., J.P.A.I., D.P., H.F., Y.K., J. Dackor, S.P.F., N.F., E.H.L., J.D.M., J.M.V., D.I.B., D.L., B.M.E., E.L.T., B. McKnight, P.F.S., D. Absher; TAG Phenotype Working Group: C. Lerman, J.K., H.H.M., L.M.T., J.A.-M., E.H.L., J.E.R., M.D.L., J.M.V., H.F., Y.K., J. Dackor, S.P.F., P.F.S., E.L.T.; data analysis: Y.K., D.M.A., F.G., E.H.L., J.D.M., J.M.V., A.U.J., L. Bernardinelli, S.R.P., S.-J.H., B.M.E., C. Ladenvall, J.R.B.P., T.T., E.L.T., J.C.B., G.L., S.W.; TAG Manuscript Writing Group: H.F., Y.K., J. Dackor, P.F.S., C. Lerman, M.D.L., J.K., J.A.-M., P.K. All authors reviewed and approved the final version of the manuscript. The corresponding authors had access to the full data set of summary results contributed by each study.
ARIC: study conception, design, management: E.B.; phenotype collection, data management: N.F.; sample processing and genotyping: N.F.; data analysis: Y.K., N.F.
Atherosclerosis Thrombosis and Vascular Biology Italian Study Group: study conception, design, management: L. Bernardinelli, P.M.M., P.A.M., D. Ardissino; phenotype collection, data management: F.M., L. Bernandinelli; data analysis: L. Bernandinelli.
ADVANCE: study conception, design, management: S.P.F., D. Absher, T.Q., C.I., T.L.A., J.W.K.; phenotype collection, data management: S.P.F., T.Q., C.I., T.L.A., J.W.K.; sample processing and genotyping: D. Absher, T.Q.; data analysis: S.P.F., D. Absher, T.L.A., J.W.K.
Baltimore Longitudinal Study of Aging: study conception, design, management: L. Ferrucci; phenotype collection, data management: L. Ferrucci; data analysis: T.T.
CHS: study conception, design, management: B.M.P., J.C.B., C.D.F.; phenotype collection, data management: B.M.P.; sample processing and genotyping: T.H., K.D.T.; data analysis: B.M.P., E.L.T., J.C.B., B. McKnight.
DGI: study conception, design, management: L.G.; phenotype collection, data management: P.A.; data analysis: P.A., C. Ladenvall.
FUSION: study conception, design, management: K.L.M., M.B.; phenotype collection, data management: H.M.S., J.T.; data analysis: H.M.S., A.U.J.
Framingham Heart Study: study conception, design, management: R.S.V., E.J.B., D.L.; phenotype collection, data management: S.R.P., R.S.V., S.-J.H., E.J.B., D.L.; data analysis: S.R.P., S.-J.H.
GAIN: study conception, design, management: D.F.L., P.V.G.; phenotype collection, data management: A.R.S., D.F.L., J. Duan, J.S., P.V.G.; sample processing and genotyping: J. Duan, P.V.G.; data analysis: A.R.S., D.F.L., J. Duan, J.S., P.V.G.
IARC/ARCAGE/Central European GWAS: phenotype collection, data management: D.Z., N.S.-D., J.L., P.R., E.F., D.M., V.B., L. Foretova, V.J., S. Benhamou, P.L., I.H., L.R., K.K., A.A., X.C., T.V.M., L. Barzan, C.C., R.L., D.I. Conway, A.Z., C.M.H., P.B.; sample processing and genotyping: J.D.M., M.L., P.B.; data analysis: E.H.L., J.D.M.
InCHIANTI: study conception, design, management: T.M.F., J.M.G., S. Bandinelli; phenotype collection, data management: Y.M.; data analysis: J.R.B.P.
MIGEN: study conception, design, management: R.E., V.S., O.M., C.J.O., D. Altshuler; phenotype collection, data management: G.L., S.M.S., R.E., V.S., B.F.V., O.M., S.K., C.J.O.; sample processing and genotyping: S.K., D. Altshuler; data analysis: G.L., B.F.V., D. Altshuler
NESDA: study conception, design, management: B.W.P., J.H.S.; phenotype collection, data management: B.W.P., J.H.S., N.V.; sample processing and genotyping: B.W.P., J.H.S.; data analysis: N.V.
NTR: study conception, design, management: D.I.B., G.W., E.J.C.d.G.; phenotype collection, data management: D.I.B., G.W., E.J.C.d.G., J.M.V.; sample processing and genotyping: D.I.B., G.W., E.J.C.d.G.; data analysis: J.M.V.
NHS: phenotype collection, data management: S.E.H., D.J.H., P.K., F.G.; sample processing and genotyping: S.J.C., S.E.H., D.J.H., P.K.; data analysis: S.J.C., F.G., P.K.
Rotterdam: study conception, design, management: A.H.; phenotype collection, data management: H.T., A.G.U.; sample processing and genotyping: H.T., A.G.U.; data analysis: H.T., A.G.U., S.W., C.M.v.D.
WGHS: study conception, design, management: B.M.E., G.P., D.I. Chasman, P.M.R.; phenotype collection, data management: B.M.E., G.P., D.I. Chasman, P.M.R.; sample processing and genotyping: G.P., D.I. Chasman; data analysis: B.M.E., G.P., D.I. Chasman.
Corresponding authors
Correspondence to Helena Furberg or Patrick F Sullivan.
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The author declare no competing financial interests.
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The Tobacco and Genetics Consortium. Genome-wide meta-analyses identify multiple loci associated with smoking behavior. Nat Genet 42, 441–447 (2010). https://doi.org/10.1038/ng.571
Received: 19 October 2009
Accepted: 18 March 2010
Published: 25 April 2010
Issue Date: May 2010
DOI: https://doi.org/10.1038/ng.571