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Protein domain, the Glossary

Index Protein domain

In molecular biology, a protein domain is a region of a protein's polypeptide chain that is self-stabilizing and that folds independently from the rest.[1]

Table of Contents

  1. 119 relations: ABC transporter, AIR synthetase (FGAM cyclase), Allosteric regulation, Alpha helix, Amino acid, Antibody, Apoptosis, Archaea, Arginine, Armadillo repeat, Auxilin, Bacteria, Beta sheet, Binding domain, BZIP domain, C2 domain, Cadherin, Calmodulin, Caspase, CATH database, Cell adhesion, Cell signaling, Christian B. Anfinsen, Chymotrypsin, Cofactor transferase family, Cryogenic electron microscopy, Cysteine, Database of Molecular Motions, Death effector domain, Dendrogram, Disulfide, DNA polymerase, DNA-binding domain, Domine Database, Drosophila melanogaster, EF hand, EGF-like domain, Enzyme, Eukaryote, Evolution, Families of Structurally Similar Proteins database, Fibronectin type III domain, Folding funnel, Fusion protein, Genetic engineering, Genome, Helix-turn-helix, Hierarchical clustering, Homologous recombination, Immune system, ... Expand index (69 more) »

ABC transporter

The ABC transporters, ATP synthase (ATP)-binding cassette transporters are a transport system superfamily that is one of the largest and possibly one of the oldest gene families. Protein domain and ABC transporter are protein families.

See Protein domain and ABC transporter

AIR synthetase (FGAM cyclase)

Phosphoribosylformylglycinamidine cyclo-ligase (AIR synthetase) is the fifth enzyme in the de novo synthesis of purine nucleotides.

See Protein domain and AIR synthetase (FGAM cyclase)

Allosteric regulation

In the fields of biochemistry and pharmacology an allosteric regulator (or allosteric modulator) is a substance that binds to a site on an enzyme or receptor distinct from the active site, resulting in a conformational change that alters the protein's activity, either enhancing or inhibiting its function.

See Protein domain and Allosteric regulation

Alpha helix

An alpha helix (or α-helix) is a sequence of amino acids in a protein that are twisted into a coil (a helix).

See Protein domain and Alpha helix

Amino acid

Amino acids are organic compounds that contain both amino and carboxylic acid functional groups.

See Protein domain and Amino acid

Antibody

An antibody (Ab) is the secreted form of a B cell receptor; the term immunoglobulin (Ig) can refer to either the membrane-bound form or the secreted form of the B cell receptor, but they are, broadly speaking, the same protein, and so the terms are often treated as synonymous.

See Protein domain and Antibody

Apoptosis

Apoptosis (from falling off) is a form of programmed cell death that occurs in multicellular organisms and in some eukaryotic, single-celled microorganisms such as yeast.

See Protein domain and Apoptosis

Archaea

Archaea (archaeon) is a domain of single-celled organisms.

See Protein domain and Archaea

Arginine

Arginine is the amino acid with the formula (H2N)(HN)CN(H)(CH2)3CH(NH2)CO2H.

See Protein domain and Arginine

Armadillo repeat

An armadillo repeat is a characteristic, repetitive amino acid sequence of about 42 residues in length that is found in many proteins.

See Protein domain and Armadillo repeat

Auxilin

Putative tyrosine-protein phosphatase auxilin is an enzyme that in humans is encoded by the DNAJC6 gene.

See Protein domain and Auxilin

Bacteria

Bacteria (bacterium) are ubiquitous, mostly free-living organisms often consisting of one biological cell.

See Protein domain and Bacteria

Beta sheet

The beta sheet (β-sheet, also β-pleated sheet) is a common motif of the regular protein secondary structure.

See Protein domain and Beta sheet

Binding domain

In molecular biology, binding domain is a protein domain which binds to a specific atom or molecule, such as calcium or DNA.

See Protein domain and Binding domain

BZIP domain

The Basic Leucine Zipper Domain (bZIP domain) is found in many DNA binding eukaryotic proteins.

See Protein domain and BZIP domain

C2 domain

A C2 domain is a protein structural domain involved in targeting proteins to cell membranes. Protein domain and c2 domain are protein superfamilies.

See Protein domain and C2 domain

Cadherin

Cadherins (named for "calcium-dependent adhesion") are cell adhesion molecules important in forming adherens junctions that let cells adhere to each other.

See Protein domain and Cadherin

Calmodulin

Calmodulin (CaM) (an abbreviation for calcium-modulated protein) is a multifunctional intermediate calcium-binding messenger protein expressed in all eukaryotic cells.

See Protein domain and Calmodulin

Caspase

Caspases (cysteine-aspartic proteases, cysteine aspartases or cysteine-dependent aspartate-directed proteases) are a family of protease enzymes playing essential roles in programmed cell death.

See Protein domain and Caspase

CATH database

The CATH Protein Structure Classification database is a free, publicly available online resource that provides information on the evolutionary relationships of protein domains. Protein domain and CATH database are protein structure and protein superfamilies.

See Protein domain and CATH database

Cell adhesion

Cell adhesion is the process by which cells interact and attach to neighbouring cells through specialised molecules of the cell surface.

See Protein domain and Cell adhesion

Cell signaling

In biology, cell signaling (cell signalling in British English) is the process by which a cell interacts with itself, other cells, and the environment.

See Protein domain and Cell signaling

Christian B. Anfinsen

Christian Boehmer Anfinsen Jr. (March 26, 1916 – May 14, 1995) was an American biochemist.

See Protein domain and Christian B. Anfinsen

Chymotrypsin

Chymotrypsin (chymotrypsins A and B, alpha-chymar ophth, avazyme, chymar, chymotest, enzeon, quimar, quimotrase, alpha-chymar, alpha-chymotrypsin A, alpha-chymotrypsin) is a digestive enzyme component of pancreatic juice acting in the duodenum, where it performs proteolysis, the breakdown of proteins and polypeptides.

See Protein domain and Chymotrypsin

Cofactor transferase family

In molecular biology, the Cofactor transferase family is a family of protein domains that includes biotin protein ligases, lipoate-protein ligases A, octanoyl-(acyl carrier protein):protein N-octanoyltransferases, and lipoyl-protein:protein N-lipoyltransferases.

See Protein domain and Cofactor transferase family

Cryogenic electron microscopy

Cryogenic electron microscopy (cryo-EM) is a cryomicroscopy technique applied on samples cooled to cryogenic temperatures. Protein domain and cryogenic electron microscopy are protein structure.

See Protein domain and Cryogenic electron microscopy

Cysteine

Cysteine (symbol Cys or C) is a semiessential proteinogenic amino acid with the formula.

See Protein domain and Cysteine

Database of Molecular Motions

The Database of Macromolecular Motions is a bioinformatics database and software-as-a-service tool that attempts to categorize macromolecular motions, sometimes also known as conformational change.

See Protein domain and Database of Molecular Motions

Death effector domain

The death-effector domain (DED) is a protein interaction domain found only in eukaryotes that regulates a variety of cellular signalling pathways.

See Protein domain and Death effector domain

Dendrogram

A dendrogram is a diagram representing a tree.

See Protein domain and Dendrogram

Disulfide

In chemistry, a disulfide (or disulphide in British English) is a compound containing a functional group or the anion. Protein domain and disulfide are protein structure.

See Protein domain and Disulfide

DNA polymerase

A DNA polymerase is a member of a family of enzymes that catalyze the synthesis of DNA molecules from nucleoside triphosphates, the molecular precursors of DNA.

See Protein domain and DNA polymerase

DNA-binding domain

A DNA-binding domain (DBD) is an independently folded protein domain that contains at least one structural motif that recognizes double- or single-stranded DNA. Protein domain and DNA-binding domain are protein superfamilies.

See Protein domain and DNA-binding domain

Domine Database

DOMINE is a database of known and predicted protein domain interactions (or domain-domain interactions). Protein domain and Domine Database are protein structure.

See Protein domain and Domine Database

Drosophila melanogaster

Drosophila melanogaster is a species of fly (an insect of the order Diptera) in the family Drosophilidae.

See Protein domain and Drosophila melanogaster

EF hand

The EF hand is a helix–loop–helix structural domain or motif found in a large family of calcium-binding proteins. Protein domain and EF hand are protein superfamilies.

See Protein domain and EF hand

EGF-like domain

The EGF-like domain is an evolutionary conserved protein domain, which derives its name from the epidermal growth factor where it was first described. Protein domain and EGF-like domain are protein superfamilies.

See Protein domain and EGF-like domain

Enzyme

Enzymes are proteins that act as biological catalysts by accelerating chemical reactions.

See Protein domain and Enzyme

Eukaryote

The eukaryotes constitute the domain of Eukarya or Eukaryota, organisms whose cells have a membrane-bound nucleus.

See Protein domain and Eukaryote

Evolution

Evolution is the change in the heritable characteristics of biological populations over successive generations.

See Protein domain and Evolution

Families of Structurally Similar Proteins database

Families of Structurally Similar Proteins or FSSP is a database of structurally superimposed proteins generated using the "Distance-matrix ALIgnment" (DALI) algorithm.The database currently contains an extended structural family for each of 330 representative protein chains. Protein domain and Families of Structurally Similar Proteins database are protein structure and protein superfamilies.

See Protein domain and Families of Structurally Similar Proteins database

Fibronectin type III domain

The Fibronectin type III domain is an evolutionarily conserved protein domain that is widely found in animal proteins.

See Protein domain and Fibronectin type III domain

Folding funnel

The folding funnel hypothesis is a specific version of the energy landscape theory of protein folding, which assumes that a protein's native state corresponds to its free energy minimum under the solution conditions usually encountered in cells. Protein domain and folding funnel are protein structure.

See Protein domain and Folding funnel

Fusion protein

Fusion proteins or chimeric (kī-ˈmir-ik) proteins (literally, made of parts from different sources) are proteins created through the joining of two or more genes that originally coded for separate proteins.

See Protein domain and Fusion protein

Genetic engineering

Genetic engineering, also called genetic modification or genetic manipulation, is the modification and manipulation of an organism's genes using technology.

See Protein domain and Genetic engineering

Genome

In the fields of molecular biology and genetics, a genome is all the genetic information of an organism.

See Protein domain and Genome

Helix-turn-helix

Helix-turn-helix is a DNA-binding domain (DBD). Protein domain and Helix-turn-helix are protein superfamilies.

See Protein domain and Helix-turn-helix

Hierarchical clustering

In data mining and statistics, hierarchical clustering (also called hierarchical cluster analysis or HCA) is a method of cluster analysis that seeks to build a hierarchy of clusters.

See Protein domain and Hierarchical clustering

Homologous recombination

Homologous recombination is a type of genetic recombination in which genetic information is exchanged between two similar or identical molecules of double-stranded or single-stranded nucleic acids (usually DNA as in cellular organisms but may be also RNA in viruses).

See Protein domain and Homologous recombination

Immune system

The immune system is a network of biological systems that protects an organism from diseases.

See Protein domain and Immune system

Immunoglobulin domain

The immunoglobulin domain, also known as the immunoglobulin fold, is a type of protein domain that consists of a 2-layer sandwich of 7-9 antiparallel β-strands arranged in two β-sheets with a Greek key topology, consisting of about 125 amino acids.

See Protein domain and Immunoglobulin domain

Immunoglobulin superfamily

The immunoglobulin superfamily (IgSF) is a large protein superfamily of cell surface and soluble proteins that are involved in the recognition, binding, or adhesion processes of cells. Protein domain and immunoglobulin superfamily are protein superfamilies.

See Protein domain and Immunoglobulin superfamily

Insulin

Insulin (from Latin insula, 'island') is a peptide hormone produced by beta cells of the pancreatic islets encoded in humans by the insulin (INS) gene.

See Protein domain and Insulin

Insulin receptor substrate

Insulin receptor substrate (IRS) is an important ligand in the insulin response of human cells.

See Protein domain and Insulin receptor substrate

Insulin receptor substrate 1

Insulin receptor substrate 1 (IRS-1) is a signaling adapter protein that in humans is encoded by the IRS1 gene.

See Protein domain and Insulin receptor substrate 1

Intrinsically disordered proteins

In molecular biology, an intrinsically disordered protein (IDP) is a protein that lacks a fixed or ordered three-dimensional structure, typically in the absence of its macromolecular interaction partners, such as other proteins or RNA. Protein domain and intrinsically disordered proteins are protein structure.

See Protein domain and Intrinsically disordered proteins

Kelch protein

Kelch proteins (and Kelch-like proteins) are a widespread group of proteins that contain multiple Kelch motifs.

See Protein domain and Kelch protein

Kinesin

A kinesin is a protein belonging to a class of motor proteins found in eukaryotic cells.

See Protein domain and Kinesin

Kringle domain

Kringle domains are autonomous protein domains that fold into large loops stabilized by 3 disulfide linkages.

See Protein domain and Kringle domain

Levinthal's paradox

Levinthal's paradox is a thought experiment in the field of computational protein structure prediction; protein folding seeks a stable energy configuration. Protein domain and Levinthal's paradox are protein structure.

See Protein domain and Levinthal's paradox

List of protein structure prediction software

This list of protein structure prediction software summarizes notable used software tools in protein structure prediction, including homology modeling, protein threading, ab initio methods, secondary structure prediction, and transmembrane helix and signal peptide prediction. Protein domain and list of protein structure prediction software are protein structure.

See Protein domain and List of protein structure prediction software

Lysine

Lysine (symbol Lys or K) is an α-amino acid that is a precursor to many proteins.

See Protein domain and Lysine

Lysozyme

Lysozyme (muramidase, N-acetylmuramide glycanhydrolase; systematic name peptidoglycan N-acetylmuramoylhydrolase) is an antimicrobial enzyme produced by animals that forms part of the innate immune system.

See Protein domain and Lysozyme

Molecular biology

Molecular biology is a branch of biology that seeks to understand the molecular basis of biological activity in and between cells, including biomolecular synthesis, modification, mechanisms, and interactions.

See Protein domain and Molecular biology

Molecular evolution

Molecular evolution describes how inherited DNA and/or RNA change over evolutionary time, and the consequences of this for proteins and other components of cells and organisms.

See Protein domain and Molecular evolution

Neutron spin echo

Neutron spin echo spectroscopy is an inelastic neutron scattering technique invented by Ferenc Mezei in the 1970s and developed in collaboration with John Hayter.

See Protein domain and Neutron spin echo

Oncogene

An oncogene is a gene that has the potential to cause cancer.

See Protein domain and Oncogene

PANDIT (database)

PANDIT is a database of multiple sequence alignments and phylogenetic trees covering many common protein domains.

See Protein domain and PANDIT (database)

Papain

Papain, also known as papaya proteinase I, is a cysteine protease enzyme present in papaya (Carica papaya) and mountain papaya (Vasconcellea cundinamarcensis).

See Protein domain and Papain

Peptide

Peptides are short chains of amino acids linked by peptide bonds.

See Protein domain and Peptide

Pfam

Pfam is a database of protein families that includes their annotations and multiple sequence alignments generated using hidden Markov models.

See Protein domain and Pfam

Phosphatidylinositol

Phosphatidylinositol or inositol phospholipid is a biomolecule.

See Protein domain and Phosphatidylinositol

Phosphatidylinositol (3,4,5)-trisphosphate

Phosphatidylinositol (3,4,5)-trisphosphate (PtdIns(3,4,5)P3), abbreviated PIP3, is the product of the class I phosphoinositide 3-kinases' (PI 3-kinases) phosphorylation of phosphatidylinositol (4,5)-bisphosphate (PIP2).

See Protein domain and Phosphatidylinositol (3,4,5)-trisphosphate

Phosphatidylinositol 3,4-bisphosphate

Phosphatidylinositol (3,4)-bisphosphate (PtdIns(3,4)P2) is a minor phospholipid component of cell membranes, yet an important second messenger.

See Protein domain and Phosphatidylinositol 3,4-bisphosphate

Phosphatidylinositol 3-phosphate

Phosphatidylinositol 3-phosphate (PI3P) is a phospholipid found in cell membranes that helps to recruit a range of proteins, many of which are involved in protein trafficking, to the membranes.

See Protein domain and Phosphatidylinositol 3-phosphate

Phosphatidylinositol 4,5-bisphosphate

Phosphatidylinositol 4,5-bisphosphate or PtdIns(4,5)P2, also known simply as PIP2 or PI(4,5)P2, is a minor phospholipid component of cell membranes.

See Protein domain and Phosphatidylinositol 4,5-bisphosphate

Phosphoribosylamine—glycine ligase

Phosphoribosylamine—glycine ligase, also known as glycinamide ribonucleotide synthetase (GARS), is an enzyme that catalyzes the chemical reaction which is the second step in purine biosynthesis.

See Protein domain and Phosphoribosylamine—glycine ligase

Phosphoribosylglycinamide formyltransferase

Phosphoribosylglycinamide formyltransferase, also known as glycinamide ribonucleotide transformylase (GAR Tfase), is an enzyme with systematic name 10-formyltetrahydrofolate:5'-phosphoribosylglycinamide N-formyltransferase.

See Protein domain and Phosphoribosylglycinamide formyltransferase

Phosphotyrosine-binding domain

In molecular biology, phosphotyrosine-binding domains are protein domains which bind to phosphotyrosine. Protein domain and phosphotyrosine-binding domain are protein families.

See Protein domain and Phosphotyrosine-binding domain

Pleckstrin homology domain

Pleckstrin homology domain (PH domain) or (PHIP) is a protein domain of approximately 120 amino acids that occurs in a wide range of proteins involved in intracellular signaling or as constituents of the cytoskeleton. Protein domain and Pleckstrin homology domain are protein superfamilies.

See Protein domain and Pleckstrin homology domain

In genetics, a promoter is a sequence of DNA to which proteins bind to initiate transcription of a single RNA transcript from the DNA downstream of the promoter.

See Protein domain and Promoter (genetics)

Protease

A protease (also called a peptidase, proteinase, or proteolytic enzyme) is an enzyme that catalyzes proteolysis, breaking down proteins into smaller polypeptides or single amino acids, and spurring the formation of new protein products.

See Protein domain and Protease

Protein

Proteins are large biomolecules and macromolecules that comprise one or more long chains of amino acid residues.

See Protein domain and Protein

Protein Data Bank

The Protein Data Bank (PDB) is a database for the three-dimensional structural data of large biological molecules such as proteins and nucleic acids, which is overseen by the Worldwide Protein Data Bank (wwPDB). Protein domain and protein Data Bank are protein structure.

See Protein domain and Protein Data Bank

Protein dimer

In biochemistry, a protein dimer is a macromolecular complex or multimer formed by two protein monomers, or single proteins, which are usually non-covalently bound. Protein domain and protein dimer are protein structure.

See Protein domain and Protein dimer

Protein domain

In molecular biology, a protein domain is a region of a protein's polypeptide chain that is self-stabilizing and that folds independently from the rest. Protein domain and protein domain are protein families, protein structure and protein superfamilies.

See Protein domain and Protein domain

Protein family

A protein family is a group of evolutionarily related proteins. Protein domain and protein family are protein families and protein superfamilies.

See Protein domain and Protein family

Protein folding

Protein folding is the physical process by which a protein, after synthesis by a ribosome as a linear chain of amino acids, changes from an unstable random coil into a more ordered three-dimensional structure. Protein domain and protein folding are protein structure.

See Protein domain and Protein folding

Protein primary structure

Protein primary structure is the linear sequence of amino acids in a peptide or protein. Protein domain and protein primary structure are protein structure.

See Protein domain and Protein primary structure

Protein quaternary structure

Protein quaternary structure is the fourth (and highest) classification level of protein structure. Protein domain and protein quaternary structure are protein structure.

See Protein domain and Protein quaternary structure

Protein secondary structure

Protein secondary structure is the local spatial conformation of the polypeptide backbone excluding the side chains. Protein domain and Protein secondary structure are protein structure.

See Protein domain and Protein secondary structure

Protein structure

Protein structure is the three-dimensional arrangement of atoms in an amino acid-chain molecule.

See Protein domain and Protein structure

Protein structure prediction

Protein structure prediction is the inference of the three-dimensional structure of a protein from its amino acid sequence—that is, the prediction of its secondary and tertiary structure from primary structure. Protein domain and protein structure prediction are protein structure.

See Protein domain and Protein structure prediction

Protein subfamily

Protein subfamily is a level of protein classification, based on their close evolutionary relationship.

See Protein domain and Protein subfamily

Protein superfamily

A protein superfamily is the largest grouping (clade) of proteins for which common ancestry can be inferred (see homology). Protein domain and protein superfamily are protein families and protein superfamilies.

See Protein domain and Protein superfamily

Protein tandem repeats

An array of protein tandem repeats is defined as several (at least two) adjacent copies having the same or similar sequence motifs. Protein domain and protein tandem repeats are protein structure.

See Protein domain and Protein tandem repeats

Protein tertiary structure

Protein tertiary structure is the three-dimensional shape of a protein. Protein domain and protein tertiary structure are protein structure.

See Protein domain and Protein tertiary structure

Protein tyrosine phosphatase

Protein tyrosine phosphatases (EC 3.1.3.48, systematic name protein-tyrosine-phosphate phosphohydrolase) are a group of enzymes that remove phosphate groups from phosphorylated tyrosine residues on proteins: Protein tyrosine (pTyr) phosphorylation is a common post-translational modification that can create novel recognition motifs for protein interactions and cellular localization, affect protein stability, and regulate enzyme activity.

See Protein domain and Protein tyrosine phosphatase

PTEN (gene)

Phosphatase and tensin homolog (PTEN) is a phosphatase in humans and is encoded by the PTEN gene.

See Protein domain and PTEN (gene)

Pyruvate kinase

X-ray Crystallography Derived --> Pyruvate kinase is the enzyme involved in the last step of glycolysis.

See Protein domain and Pyruvate kinase

Residue (chemistry)

Within the sciences residue is a complex concept with multiple meanings.

See Protein domain and Residue (chemistry)

Sequence motif

In biology, a sequence motif is a nucleotide or amino-acid sequence pattern that is widespread and usually assumed to be related to biological function of the macromolecule.

See Protein domain and Sequence motif

Serine protease

Serine proteases (or serine endopeptidases) are enzymes that cleave peptide bonds in proteins.

See Protein domain and Serine protease

SH2 domain

The SH2 (Src Homology 2) domain is a structurally conserved protein domain contained within the Src oncoprotein and in many other intracellular signal-transducing proteins.

See Protein domain and SH2 domain

SH3 domain

The SRC Homology 3 Domain (or SH3 domain) is a small protein domain of about 60 amino acid residues. Protein domain and SH3 domain are protein superfamilies.

See Protein domain and SH3 domain

Short linear motif

In molecular biology short linear motifs (SLiMs), linear motifs or minimotifs are short stretches of protein sequence that mediate protein–protein interaction.

See Protein domain and Short linear motif

Shoshana Wodak

Shoshana Wodak is a computational biologist and an organizational leader in the field of protein-protein docking.

See Protein domain and Shoshana Wodak

Structural alignment

Structural alignment attempts to establish homology between two or more polymer structures based on their shape and three-dimensional conformation.

See Protein domain and Structural alignment

Structural biology

Structural biology, as defined by the Journal of Structural Biology, deals with structural analysis of living material (formed, composed of, and/or maintained and refined by living cells) at every level of organization. Protein domain and structural biology are protein structure.

See Protein domain and Structural biology

Structural Classification of Proteins database

The Structural Classification of Proteins (SCOP) database is a largely manual classification of protein structural domains based on similarities of their structures and amino acid sequences. Protein domain and structural Classification of Proteins database are protein structure and protein superfamilies.

See Protein domain and Structural Classification of Proteins database

Structural motif

In a chain-like biological molecule, such as a protein or nucleic acid, a structural motif is a common three-dimensional structure that appears in a variety of different, evolutionarily unrelated molecules. Protein domain and structural motif are protein structure.

See Protein domain and Structural motif

Supersecondary structure

A supersecondary structure is a compact three-dimensional protein structure of several adjacent elements of a secondary structure that is smaller than a protein domain or a subunit.

See Protein domain and Supersecondary structure

Tensin

Tensin was first identified as a 220 kDa multi-domain protein localized to the specialized regions of plasma membrane called integrin-mediated focal adhesions (which are formed around a transmembrane core of an αβ integrin heterodimer).

See Protein domain and Tensin

TIM barrel

The TIM barrel (triose-phosphate isomerase), also known as an alpha/beta barrel, is a conserved protein fold consisting of eight alpha helices (α-helices) and eight parallel beta strands (β-strands) that alternate along the peptide backbone. Protein domain and TIM barrel are protein superfamilies.

See Protein domain and TIM barrel

Titin

Titin (contraction for Titan protein) (also called connectin) is a protein that in humans is encoded by the TTN gene.

See Protein domain and Titin

Transcription factor

In molecular biology, a transcription factor (TF) (or sequence-specific DNA-binding factor) is a protein that controls the rate of transcription of genetic information from DNA to messenger RNA, by binding to a specific DNA sequence. Protein domain and transcription factor are protein families.

See Protein domain and Transcription factor

Troponin C

Troponin C is a protein which is part of the troponin complex.

See Protein domain and Troponin C

Tyrosine kinase

A tyrosine kinase is an enzyme that can transfer a phosphate group from ATP to the tyrosine residues of specific proteins inside a cell.

See Protein domain and Tyrosine kinase

Zinc finger

A zinc finger is a small protein structural motif that is characterized by the coordination of one or more zinc ions (Zn2+) which stabilizes the fold. Protein domain and zinc finger are protein superfamilies.

See Protein domain and Zinc finger

References

[1] https://en.wikipedia.org/wiki/Protein_domain

Also known as Conserved domain, Conserved domains, Domain (protein), Domain swapping, Domain-swapping, Enzyme domain, Enzyme domains, Multi-domain, Multi-domain protein, Protein domains, Protein module, Structural domain.

, Immunoglobulin domain, Immunoglobulin superfamily, Insulin, Insulin receptor substrate, Insulin receptor substrate 1, Intrinsically disordered proteins, Kelch protein, Kinesin, Kringle domain, Levinthal's paradox, List of protein structure prediction software, Lysine, Lysozyme, Molecular biology, Molecular evolution, Neutron spin echo, Oncogene, PANDIT (database), Papain, Peptide, Pfam, Phosphatidylinositol, Phosphatidylinositol (3,4,5)-trisphosphate, Phosphatidylinositol 3,4-bisphosphate, Phosphatidylinositol 3-phosphate, Phosphatidylinositol 4,5-bisphosphate, Phosphoribosylamine—glycine ligase, Phosphoribosylglycinamide formyltransferase, Phosphotyrosine-binding domain, Pleckstrin homology domain, Promoter (genetics), Protease, Protein, Protein Data Bank, Protein dimer, Protein domain, Protein family, Protein folding, Protein primary structure, Protein quaternary structure, Protein secondary structure, Protein structure, Protein structure prediction, Protein subfamily, Protein superfamily, Protein tandem repeats, Protein tertiary structure, Protein tyrosine phosphatase, PTEN (gene), Pyruvate kinase, Residue (chemistry), Sequence motif, Serine protease, SH2 domain, SH3 domain, Short linear motif, Shoshana Wodak, Structural alignment, Structural biology, Structural Classification of Proteins database, Structural motif, Supersecondary structure, Tensin, TIM barrel, Titin, Transcription factor, Troponin C, Tyrosine kinase, Zinc finger.