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CDH3 (gene) - Wikipedia

From Wikipedia, the free encyclopedia

CDH3
Available structures
PDBOrtholog search: PDBe RCSB
List of PDB id codes

4OY9

Identifiers
AliasesCDH3, CDHP, HJMD, PCAD, cadherin 3
External IDsOMIM: 114021; MGI: 88356; HomoloGene: 20425; GeneCards: CDH3; OMA:CDH3 - orthologs
Gene location (Human)
Chromosome 16 (human)
Chr.Chromosome 16 (human)[1]

Chromosome 16 (human)

Genomic location for CDH3

Genomic location for CDH3

Band16q22.1Start68,636,189 bp[1]
End68,727,468 bp[1]
Gene location (Mouse)
Chromosome 8 (mouse)
Chr.Chromosome 8 (mouse)[2]

Chromosome 8 (mouse)

Genomic location for CDH3

Genomic location for CDH3

Band8 D3|8 53.16 cMStart107,237,523 bp[2]
End107,283,929 bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • secondary oocyte

  • lactiferous duct

  • gingival epithelium

  • olfactory zone of nasal mucosa

  • left ovary

  • retinal pigment epithelium

  • nasal epithelium

  • periodontal fiber

  • right ovary

  • hair follicle
Top expressed in
  • decidua

  • gastrula

  • choroid plexus of fourth ventricle

  • genital tubercle

  • tail of embryo

  • lip

  • otic vesicle

  • saccule

  • secondary oocyte

  • molar
More reference expression data
BioGPS
More reference expression data
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

1001

12560

Ensembl

ENSG00000062038

ENSMUSG00000061048

UniProt

P22223

P10287

RefSeq (mRNA)

NM_001793
NM_001317195
NM_001317196

NM_001037809
NM_007665

RefSeq (protein)

NP_001304124
NP_001304125
NP_001784

NP_001032898
NP_031691

Location (UCSC)Chr 16: 68.64 – 68.73 MbChr 8: 107.24 – 107.28 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Cadherin-3, also known as P-Cadherin, is a protein that in humans is encoded by the CDH3 gene.[5][6]

This gene is a classical cadherin from the cadherin superfamily. The encoded protein is a calcium-dependent cell-cell adhesion glycoprotein composed of five extracellular cadherin repeats, a transmembrane region and a highly conserved cytoplasmic tail. This gene is located in a six-cadherin cluster in a region on the long arm of chromosome 16 that is involved in loss of heterozygosity events in breast and prostate cancer. In addition, aberrant expression of this protein is observed in cervical adenocarcinomas.

Clinical significance

[edit]

Mutations in this gene have been associated with congenital hypotrichosis with juvenile macular dystrophy.[6]

CDH3 (gene) has been shown to interact with:

Cadherin-3 was first described in 1986 by Masatoshi Takeichi's laboratory as a new cadherin molecule most abundant in the developing mouse placenta – hence "P-cadherin".[10][11]

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000062038Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000061048Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ Kaupmann K, Becker-Follmann J, Scherer G, Jockusch H, Starzinski-Powitz A (Oct 1992). "The gene for the cell adhesion molecule M-cadherin maps to mouse chromosome 8 and human chromosome 16q24.1-qter and is near the E-cadherin (uvomorulin) locus in both species". Genomics. 14 (2): 488–90. doi:10.1016/S0888-7543(05)80247-2. PMID 1427864.
  6. ^ a b "Entrez Gene: CDH3 cadherin 3, type 1, P-cadherin (placental)".
  7. ^ a b c d Klingelhöfer J, Troyanovsky RB, Laur OY, Troyanovsky S (Aug 2000). "Amino-terminal domain of classic cadherins determines the specificity of the adhesive interactions". Journal of Cell Science. 113 (16): 2829–36. doi:10.1242/jcs.113.16.2829. PMID 10910767.
  8. ^ a b Schmeiser K, Grand RJ (Apr 1999). "The fate of E- and P-cadherin during the early stages of apoptosis". Cell Death and Differentiation. 6 (4): 377–86. doi:10.1038/sj.cdd.4400504. PMID 10381631.
  9. ^ Lehtonen S, Lehtonen E, Kudlicka K, Holthöfer H, Farquhar MG (Sep 2004). "Nephrin forms a complex with adherens junction proteins and CASK in podocytes and in Madin-Darby canine kidney cells expressing nephrin". The American Journal of Pathology. 165 (3): 923–36. doi:10.1016/S0002-9440(10)63354-8. PMC 1618613. PMID 15331416.
  10. ^ Vieira AF, Paredes J (October 2015). "P-cadherin and the journey to cancer metastasis". Mol Cancer. 14: 178. doi:10.1186/s12943-015-0448-4. PMC 4595126. PMID 26438065.
  11. ^ Nose A, Takeichi M (December 1986). "A novel cadherin cell adhesion molecule: its expression patterns associated with implantation and organogenesis of mouse embryos". J Cell Biol. 103 (6 Pt 2): 2649–58. doi:10.1083/jcb.103.6.2649. PMC 2114609. PMID 3539943.