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40S ribosomal protein S18 - Wikipedia

From Wikipedia, the free encyclopedia

RPS18
Available structures
PDBOrtholog search: PDBe RCSB
List of PDB id codes

4UG0, 4V6X, 5A2Q, 5AJ0, 4KZY, 3J7R, 4D61, 4KZX, 4D5L, 4V5Z, 5FLX, 4UJD, 3J7P, 4KZZ, 4UJE, 4UJC

Identifiers
AliasesRPS18, D6S218E, HKE3, KE-3, KE3, S18, ribosomal protein S18
External IDsOMIM: 180473; MGI: 98146; HomoloGene: 88764; GeneCards: RPS18; OMA:RPS18 - orthologs
Gene location (Human)
Chromosome 6 (human)
Chr.Chromosome 6 (human)[1]

Chromosome 6 (human)

Genomic location for RPS18

Genomic location for RPS18

Band6p21.32Start33,272,075 bp[1]
End33,276,511 bp[1]
Gene location (Mouse)
Chromosome 17 (mouse)
Chr.Chromosome 17 (mouse)[2]

Chromosome 17 (mouse)

Genomic location for RPS18

Genomic location for RPS18

Band17 B1|17 17.98 cMStart34,170,973 bp[2]
End34,174,975 bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • left ovary

  • right ovary

  • skin of leg

  • skin of abdomen

  • canal of the cervix

  • lymph node

  • ectocervix

  • uterine tube

  • lactiferous gland

  • vagina
Top expressed in
  • ventricular zone

  • lip

  • blastocyst

  • yolk sac

  • morula

  • neural layer of retina

  • right kidney

  • tail of embryo

  • genital tubercle

  • granulocyte
More reference expression data
BioGPS
n/a
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

6222

20084

Ensembl
ENSG00000226225
ENSG00000096150
ENSG00000231500
ENSG00000235650
ENSG00000223367

ENSG00000227794

ENSMUSG00000008668

UniProt

P62269

P62270

RefSeq (mRNA)

NM_022551

NM_011296
NM_138946

RefSeq (protein)

NP_072045

NP_035426

Location (UCSC)Chr 6: 33.27 – 33.28 MbChr 17: 34.17 – 34.17 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

40S ribosomal protein S18 is a protein that in humans is encoded by the RPS18 gene.[5][6][7]

Ribosomes, the organelles that catalyze protein synthesis, consist of a small 40S subunit and a large 60S subunit. Together these subunits are composed of 4 RNA species and approximately 80 structurally distinct proteins. This gene encodes a ribosomal protein that is a component of the 40S subunit. The protein belongs to the S13P family of ribosomal proteins. It is located in the cytoplasm. The gene product of the E. coli ortholog (ribosomal protein S13) is involved in the binding of fMet-tRNA, and thus, in the initiation of translation. This gene is an ortholog of mouse Ke3. As is typical for genes encoding ribosomal proteins, there are multiple processed pseudogenes of this gene dispersed through the genome.[7]

  1. ^ a b c ENSG00000096150, ENSG00000231500, ENSG00000235650, ENSG00000223367, ENSG00000227794 GRCh38: Ensembl release 89: ENSG00000226225, ENSG00000096150, ENSG00000231500, ENSG00000235650, ENSG00000223367, ENSG00000227794Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000008668Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ Chassin D, Bellet D, Koman A (Mar 1993). "The human homolog of ribosomal protein S18". Nucleic Acids Res. 21 (3): 745. doi:10.1093/nar/21.3.745. PMC 309181. PMID 8441687.
  6. ^ Kenmochi N, Kawaguchi T, Rozen S, Davis E, Goodman N, Hudson TJ, Tanaka T, Page DC (Aug 1998). "A map of 75 human ribosomal protein genes". Genome Res. 8 (5): 509–23. doi:10.1101/gr.8.5.509. PMID 9582194.
  7. ^ a b "Entrez Gene: RPS18 ribosomal protein S18".
  • Overview of all the structural information available in the PDB for UniProt: P62269 (40S ribosomal protein S18) at the PDBe-KB.