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40S ribosomal protein S2 - Wikipedia

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RPS2
Available structures
PDBOrtholog search: PDBe RCSB
List of PDB id codes

4UG0, 4V6X, 5A2Q, 5AJ0, 5FLX, 4D61, 4D5L, 4UJD, 4UJE, 4UJC

Identifiers
AliasesRPS2, LLREP3, S2, ribosomal protein S2
External IDsOMIM: 603624; MGI: 105110; HomoloGene: 37714; GeneCards: RPS2; OMA:RPS2 - orthologs
Gene location (Human)
Chromosome 16 (human)
Chr.Chromosome 16 (human)[1]

Chromosome 16 (human)

Genomic location for RPS2

Genomic location for RPS2

Band16p13.3Start1,962,058 bp[1]
End1,964,841 bp[1]
Gene location (Mouse)
Chromosome 17 (mouse)
Chr.Chromosome 17 (mouse)[2]

Chromosome 17 (mouse)

Genomic location for RPS2

Genomic location for RPS2

Band17|17 A3.3Start24,937,090 bp[2]
End24,940,903 bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • stromal cell of endometrium

  • right uterine tube

  • right ovary

  • body of pancreas

  • left ovary

  • ventricular zone

  • mucosa of transverse colon

  • ganglionic eminence

  • granulocyte

  • zone of skin
Top expressed in
  • ventricular zone

  • lip

  • esophagus

  • ovary

  • zone of skin

  • lens

  • ganglionic eminence

  • ileum

  • quadriceps femoris muscle

  • uterus
More reference expression data
BioGPS
n/a
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

6187

16898

Ensembl

ENSG00000140988

ENSMUSG00000044533

UniProt

P15880

P25444

RefSeq (mRNA)

NM_002952

NM_008503

RefSeq (protein)

NP_002943

NP_032529

Location (UCSC)Chr 16: 1.96 – 1.96 MbChr 17: 24.94 – 24.94 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

The RPS2 gene is the gene which, in humans, encodes the 40S ribosomal protein S2.[5][6]

Ribosomes, the organelles that catalyze protein synthesis, consist of a small 40S subunit and a large 60S subunit. Together these subunits are composed of 4 RNA species and approximately 80 structurally distinct proteins. This gene encodes a ribosomal protein that is a component of the 40S subunit. The protein belongs to the S5P family of ribosomal proteins. It is located in the cytoplasm. This gene shares sequence similarity with mouse LLRep3. It is co-transcribed with the small nucleolar RNA gene U64, which is located in its third intron. As is typical for genes encoding ribosomal proteins, there are multiple processed pseudogenes of this gene dispersed through the genome.[6]

RPS2 has been shown to interact with PRMT3.[7]

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000140988Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000044533Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ Kenmochi N, Kawaguchi T, Rozen S, Davis E, Goodman N, Hudson TJ, Tanaka T, Page DC (Aug 1998). "A map of 75 human ribosomal protein genes". Genome Res. 8 (5): 509–23. doi:10.1101/gr.8.5.509. PMID 9582194.
  6. ^ a b "Entrez Gene: RPS2 ribosomal protein S2".
  7. ^ Choi, Seeyoung; Jung Cho-Rok; Kim Jin-Young; Im Dong-Soo (Sep 2008). "PRMT3 inhibits ubiquitination of ribosomal protein S2 and together forms an active enzyme complex". Biochim. Biophys. Acta. 1780 (9): 1062–9. doi:10.1016/j.bbagen.2008.05.010. ISSN 0006-3002. PMID 18573314.
  • Overview of all the structural information available in the PDB for UniProt: P15880 (40S ribosomal protein S2) at the PDBe-KB.