| 1984 | Requiem | Mozart; Christopher Hogwood, Kirkby, Watkinson, Rolfe‐Johnson, Thomas, Westminster Cathedral Boys Choir, Chorus & Orchestra of Academy of Ancient Music | | 3 |
| 1985 | Sacred Vocal Music | Monteverdi; The Parley of Instruments, Emma Kirkby, Ian Partridge, David Thomas, Roy Goodman, Peter Holman | | 3 |
| 1985 | Il Combattimento di Tancredi e Clorinda / Lamento d'Arianna | Claudio Monteverdi; Carolyn Watkinson, Nigel Rogers, Patrizia Kwella, David Thomas, Musica Antiqua Köln, Reinhard Goebel | | 1 |
| 1987 | Aci, Galatea e Polifemo (Serenata a tre, 1708) | Handel – Emma Kirkby, Carolyn Watkinson, David Thomas, London Baroque, Charles Medlam | | 1 |
| 1988 | Songs and Dialogues | Purcell; Emma Kirkby, David Thomas, Anthony Rooley | | 2 |
| 1988 | La Resurrezione (1708) | George Frideric Handel - Kirkby / Kwella / Watkinson / Partridge / Thomas / Academy of Ancient Music / Christopher Hogwood | | 1 |
| 1988 | Madrigals and Wedding Songs for Diana | The Consort of Musicke, Anthony Rooley, Emma Kirkby, David Thomas | | 1 |
| 1990 | Arias for Montagnana | George Frideric Handel; David Thomas, Philharmonia Baroque Orchestra, Nicholas McGegan | | 1 |
| 1990 | Mass in C minor, K. 427 | Wolfgang Amadeus Mozart; Arleen Augér, Lynne Dawson, John Mark Ainsley, David Thomas, Winchester Cathedral Choir, Winchester College Quiristers, Academy of Ancient Music, Christopher Hogwood | | 2 |
| 1990 | Pulcinella / Danses concertantes | Stravinksy; Richard Hickox, City of London Sinfonia, Ann Murray, Martyn Hill, David Thomas | | 1 |
| 1990 | Requiem | Mozart; Gundula Janowitz, Julia Bernheimer, Martyn Hill, David Thomas, The Hanover Band and Chorus, Roy Goodman | | 1 |
| 1991 | Orlando (1990 studio cast) | George Frideric Handel; James Bowman, Arleen Augér, Catherine Robbin, Emma Kirkby, David Thomas, The Academy of Ancient Music, Christopher Hogwood | | 1 |
| 1991 | Dido and Aeneas | Purcell; Emma Kirkby, David Thomas, Judith Nelson, Taverner Choir, Taverner Players, Andrew Parrott | | 2 |
| 1992 | La Dafne | Marco da Gagliano; Monteverdi‐Chor Hamburg, Camerata Accademica Hamburg, Colin Tilney, Jürgen JürgensNorma Lerer, Barbara Schlick, Nigel Rogers, Ian Partridge, Berthold Possemeyer, Ine Kollecker & David Thomas | | 1 |
| 1992 | Theodora | Handel - Lorraine Hunt, Drew Minter, Jennifer Lane, Jeffrey Thomas, David Thomas, Chamber Chorus of the University of California, Berkeley, Philharmonia Baroque Orchestra & Nicholas McGegan | | 1 |
| 1993 | Judas Maccabaeus | George Frideric Handel; Guy de Mey, Lisa Saffer, Patricia Spence, David Thomas, UC Berkeley Chamber Chorus, Philharmonia Baroque Orchestra | | 1 |
| 1993 | Shakespeare's Lutenist | Robert Johnson; Emma Kirkby, David Thomas, Anthony Rooley | | 1 |
| 1994 | Dido & Aeneas | Henry Purcell; Bott, Kirkby, Ainsley, Thomas, Chance, Baird, Priday, Stowe, Lochmann, Chorus and Orchestra of The Academy of Ancient Music, Christopher Hogwood | 3 | 4 |
| 1995 | The Purcell Circle – The Mantle of Orpheus | Kirkby, Tubb, Nichols, King, Cornwell, Grant, Thomas, The Consort of Musicke | | 1 |
| 1996 | Handel - Apollo e Dafne | Philharmonia Baroque Orchestra, Judith Nelson, David Thomas & Nicholas McGegan | | 1 |
| 1996 | King of the Low Seas : Arias by Caccini and Puliaschi | Caccini, Puliaschi; David Thomas | | 1 |
| 1997 | Great Organ Mass - St. Cecilia Mass - Missa Sancti Nicolai - Missa Brevis | Joseph Haydn; Judith Nelson, Margaret Cable, Martyn Hill, David Thomas, Simon Preston, Christ Church Cathedral Choir, Oxford, Academy of Ancient Music | | 2 |
| 2007 | The Fairy Queen | Henry Purcell; Eiddwen Harrhy, Jennifer Smith, Judith Nelson, Elisabeth Priday, Timothy Penrose, Wynford Evans, Martyn Hill, Stephen Varcoe, David Thomas, Ashley Stafford, Monteverdi Choir, English Baroque Soloists, Sir John Eliot Gardiner | | 1 |