Overriding standard decoding: implications of recoding for ribosome function and enrichment of gene expression - PubMed

Affiliations

• PMID: 12762024
• DOI: 10.1101/sqb.2001.66.217

Review

Overriding standard decoding: implications of recoding for ribosome function and enrichment of gene expression

J F Atkins et al. Cold Spring Harb Symp Quant Biol. 2001.

Similar articles

• Probing ribosome structure and function by mutagenesis.

  Gregory ST, Bayfield MA, O'Connor M, Thompson J, Dahlberg AE. Gregory ST, et al. Cold Spring Harb Symp Quant Biol. 2001;66:101-8. doi: 10.1101/sqb.2001.66.101. Cold Spring Harb Symp Quant Biol. 2001. PMID: 12762012 Review. No abstract available.

• X-ray crystal structures of the WT and a hyper-accurate ribosome from Escherichia coli.

  Vila-Sanjurjo A, Ridgeway WK, Seymaner V, Zhang W, Santoso S, Yu K, Cate JH. Vila-Sanjurjo A, et al. Proc Natl Acad Sci U S A. 2003 Jul 22;100(15):8682-7. doi: 10.1073/pnas.1133380100. Epub 2003 Jul 9. Proc Natl Acad Sci U S A. 2003. PMID: 12853578 Free PMC article.

• Programmed +1 translational frameshifting in the yeast Saccharomyces cerevisiae results from disruption of translational error correction.

  Stahl G, Ben Salem S, Li Z, McCarty G, Raman A, Shah M, Farabaugh PJ. Stahl G, et al. Cold Spring Harb Symp Quant Biol. 2001;66:249-58. doi: 10.1101/sqb.2001.66.249. Cold Spring Harb Symp Quant Biol. 2001. PMID: 12762026 Review. No abstract available.

• Ribosome origami.

  Rorbach J, Aibara S, Amunts A. Rorbach J, et al. Nat Struct Mol Biol. 2017 Nov 7;24(11):879-881. doi: 10.1038/nsmb.3497. Nat Struct Mol Biol. 2017. PMID: 29112687 No abstract available.

• Structural dynamics of ribosomal RNA during decoding on the ribosome.

  Rodnina MV, Daviter T, Gromadski K, Wintermeyer W. Rodnina MV, et al. Biochimie. 2002 Aug;84(8):745-54. doi: 10.1016/s0300-9084(02)01409-8. Biochimie. 2002. PMID: 12457562 Review.

Cited by

• Slipping and sliding: frameshift mutations in herpes simplex virus thymidine kinase and drug-resistance.

  Griffiths A. Griffiths A. Drug Resist Updat. 2011 Dec;14(6):251-9. doi: 10.1016/j.drup.2011.08.003. Epub 2011 Sep 22. Drug Resist Updat. 2011. PMID: 21940196 Free PMC article. Review.

• The phenotype of many independently isolated +1 frameshift suppressor mutants supports a pivotal role of the P-site in reading frame maintenance.

  Jäger G, Nilsson K, Björk GR. Jäger G, et al. PLoS One. 2013 Apr 4;8(4):e60246. doi: 10.1371/journal.pone.0060246. Print 2013. PLoS One. 2013. PMID: 23593181 Free PMC article.

• The three transfer RNAs occupying the A, P and E sites on the ribosome are involved in viral programmed -1 ribosomal frameshift.

  Léger M, Dulude D, Steinberg SV, Brakier-Gingras L. Léger M, et al. Nucleic Acids Res. 2007;35(16):5581-92. doi: 10.1093/nar/gkm578. Epub 2007 Aug 17. Nucleic Acids Res. 2007. PMID: 17704133 Free PMC article.

• Protein multifunctionality: principles and mechanisms.

  Zaretsky JZ, Wreschner DH. Zaretsky JZ, et al. Transl Oncogenomics. 2008 May 15;3:99-136. Transl Oncogenomics. 2008. PMID: 21566747 Free PMC article.

• EF-G catalyzed translocation dynamics in the presence of ribosomal frameshifting stimulatory signals.

  Kim HK, Tinoco I Jr. Kim HK, et al. Nucleic Acids Res. 2017 Mar 17;45(5):2865-2874. doi: 10.1093/nar/gkw1020. Nucleic Acids Res. 2017. PMID: 27799473 Free PMC article.

Publication types

MeSH terms

Substances

LinkOut - more resources

• Full Text Sources

  • HighWire

• Other Literature Sources

  • The Lens - Patent Citations Database