BEDOPS: high-performance genomic feature operations - PubMed
- ️Sun Jan 01 2012
Integrated epigenomic exposure signature discovery.
Schuetter J, Minard-Smith A, Hill B, Beare JL, Vornholt A, Burke TW, Murugan V, Smith AK, Chandrasekaran T, Shamma HJ, Kahaian SC, Fillinger KL, Amper MAS, Cheng WS, Ge Y, George MC, Guevara K, Lovette-Okwara N, Mahajan A, Marjanovic N, Mendelev N, Fowler VG, McClain MT, Miller CM, Mofsowitz S, Nair VD, Nudelman G, Evans TG, Castellino F, Ramos I, Rirak S, Ruf-Zamojski F, Seenarine N, Soares-Shanoski A, Vangeti S, Vasoya M, Yu X, Zaslavsky E, Ndhlovu LC, Corley MJ, Bowler S, Deeks SG, Letizia AG, Sealfon SC, Woods CW, Spurbeck RR. Schuetter J, et al. Epigenomics. 2024;16(14):1013-1029. doi: 10.1080/17501911.2024.2375187. Epub 2024 Sep 3. Epigenomics. 2024. PMID: 39225561 Free PMC article.
Index and biological spectrum of human DNase I hypersensitive sites.
Meuleman W, Muratov A, Rynes E, Halow J, Lee K, Bates D, Diegel M, Dunn D, Neri F, Teodosiadis A, Reynolds A, Haugen E, Nelson J, Johnson A, Frerker M, Buckley M, Sandstrom R, Vierstra J, Kaul R, Stamatoyannopoulos J. Meuleman W, et al. Nature. 2020 Aug;584(7820):244-251. doi: 10.1038/s41586-020-2559-3. Epub 2020 Jul 29. Nature. 2020. PMID: 32728217 Free PMC article.