Phylogenetic analysis of the Black Stork Ciconia nigra (Ciconiiformes: Ciconiidae) based on complete mitochondrial genome - PubMed

Phylogenetic analysis of the Black Stork Ciconia nigra (Ciconiiformes: Ciconiidae) based on complete mitochondrial genome

Mengyao Liu et al. Mitochondrial DNA A DNA Mapp Seq Anal. 2016.

Abstract

The Black Stork, Ciconia nigra belongs to family Ciconiidae, which is evaluated as Least Concern by IUCN. In this study, the complete mitochondrial genome of C. nigra was first sequenced and characterized, which was 17,795 bp in length. The mt-genome has tandem repeats of 80 bp and 78 bp repeat units, and AAACAAC and AAACAAACAAC tandem repeats in D-loop region. It is notable that a single extra base "C" at position 174 was inserted in gene ND3. Bayesian inference, maximum likelihood methods were used to construct phylogenetic trees based on 12 heavy-strand protein-coding genes. Phylogenetic analyses showed that Ardeidae diverged earlier than Ciconiidae, Cathartida and Threskiornithidae, and Ciconiidae had closest relationship to Cathartida. C. nigra diverged first among three Ciconia birds.

Keywords: Ciconia nigra; complete mitochondrial genome; phylogeny.

Similar articles

• Complete mitochondrial genome of Ciconia nigra (Ciconiiformes: Ciconiidae).

  Lee MY, Jeon HS, Kim YJ, An J. Lee MY, et al. Mitochondrial DNA B Resour. 2017 Apr 24;2(1):230-231. doi: 10.1080/23802359.2017.1310608. Mitochondrial DNA B Resour. 2017. PMID: 33473779 Free PMC article.

• Complete mitochondrial genome of Ciconia nigra (Ciconiiformes: Ciconiidae), a threatened stork in China.

  Liang WL, Zhu J, Ren ZM. Liang WL, et al. Mitochondrial DNA B Resour. 2019 Jul 13;4(2):2509-2510. doi: 10.1080/23802359.2019.1640082. Mitochondrial DNA B Resour. 2019. PMID: 33365603 Free PMC article.

• The mitochondrial genome of the Cinnamon Bittern, Ixobrychus cinnamomeus (Pelecaniformes: Ardeidae): sequence, structure and phylogenetic analysis.

  Zhang L, Wang L, Gowda V, Wang M, Li X, Kan X. Zhang L, et al. Mol Biol Rep. 2012 Aug;39(8):8315-26. doi: 10.1007/s11033-012-1681-1. Epub 2012 Jun 15. Mol Biol Rep. 2012. PMID: 22699875

• Complete mitochondrial genome of Gymnodiptychus pachycheilus (Teleostei: Cypriniformes: Cyprinidae).

  Wu B, Deng Y, Wu J, Yan C, Song Z. Wu B, et al. Mitochondrial DNA A DNA Mapp Seq Anal. 2016;27(1):251-2. doi: 10.3109/19401736.2014.883610. Epub 2014 Feb 13. Mitochondrial DNA A DNA Mapp Seq Anal. 2016. PMID: 24521493

• The complete mitochondrial genome sequence of Eudocimus ruber (Pelecaniformes:Threskiornithidae).

  Chang L, He S, Zhang J, Zhang Q, Li S. Chang L, et al. Mitochondrial DNA A DNA Mapp Seq Anal. 2016 Jul;27(4):2941-2. doi: 10.3109/19401736.2015.1060451. Epub 2015 Jun 23. Mitochondrial DNA A DNA Mapp Seq Anal. 2016. PMID: 26099973

Cited by

• Complete mitochondrial genome of Ciconia nigra (Ciconiiformes: Ciconiidae).

  Lee MY, Jeon HS, Kim YJ, An J. Lee MY, et al. Mitochondrial DNA B Resour. 2017 Apr 24;2(1):230-231. doi: 10.1080/23802359.2017.1310608. Mitochondrial DNA B Resour. 2017. PMID: 33473779 Free PMC article.

• Complete mitochondrial genome of Ciconia nigra (Ciconiiformes: Ciconiidae), a threatened stork in China.

  Liang WL, Zhu J, Ren ZM. Liang WL, et al. Mitochondrial DNA B Resour. 2019 Jul 13;4(2):2509-2510. doi: 10.1080/23802359.2019.1640082. Mitochondrial DNA B Resour. 2019. PMID: 33365603 Free PMC article.

Publication types

MeSH terms

LinkOut - more resources

• Full Text Sources

  • Atypon

• Other Literature Sources

  • scite Smart Citations