Sieving of double-stranded DNA during agarose gel electrophoresis - PubMed
Review
. 1989 May-Jun;10(5-6):327-31.
doi: 10.1002/elps.1150100510.
Affiliations
- PMID: 2670547
- DOI: 10.1002/elps.1150100510
Review
Sieving of double-stranded DNA during agarose gel electrophoresis
P Serwer. Electrophoresis. 1989 May-Jun.
Abstract
Agarose gel electrophoresis is used to fractionate linear, double-stranded DNA by its length. Sieving of the gel is the cause of this fractionation and has been investigated by developing theoretical models and by quantifying sieving observed during electrophoresis. Here are reviewed the following aspects of the fractionation of linear, double-stranded DNA by agarose gel electrophoresis: (1) the basic observations that qualitatively characterize these fractionations, (2) evidence for the deformation of DNA's random coil, (3) quantitative analysis of the relationship of observed electrophoretic mobility to the DNA's length, (4) theoretical models that have been developed to explain data presented in Sections 1-3, (5) observations not yet quantitatively explained by models, and (6) some aspects of the use of a variable electrical field (pulsed-field gel electrophoresis) to improve separations.
Similar articles
-
The mechanism of DNA's fractionation during pulsed-field agarose gel electrophoresis: a hypothesis.
Serwer P. Serwer P. Appl Theor Electrophor. 1988;1(1):19-22. Appl Theor Electrophor. 1988. PMID: 3154956
-
DNA gel electrophoresis: effect of field intensity and agarose concentration on band inversion.
Slater GW, Turmel C, Lalande M, Noolandi J. Slater GW, et al. Biopolymers. 1989 Oct;28(10):1793-9. doi: 10.1002/bip.360281012. Biopolymers. 1989. PMID: 2597732
-
The sieving of spheres during agarose gel electrophoresis: quantitation and modeling.
Griess GA, Moreno ET, Easom RA, Serwer P. Griess GA, et al. Biopolymers. 1989 Aug;28(8):1475-84. doi: 10.1002/bip.360280811. Biopolymers. 1989. PMID: 2752101
-
Viovy JL. Viovy JL. Electrophoresis. 1989 May-Jun;10(5-6):429-41. doi: 10.1002/elps.1150100521. Electrophoresis. 1989. PMID: 2670549 Review.
-
[Analysis of chromosomal DNA by newly developed gel electrophoresis].
Matsumoto T, Niwa O. Matsumoto T, et al. Tanpakushitsu Kakusan Koso. 1986 Oct;31(13):1382-8. Tanpakushitsu Kakusan Koso. 1986. PMID: 3544067 Review. Japanese. No abstract available.
Cited by
-
Korde DS, Humpel C. Korde DS, et al. MethodsX. 2022 Jul 6;9:101779. doi: 10.1016/j.mex.2022.101779. eCollection 2022. MethodsX. 2022. PMID: 35865187 Free PMC article.
-
Spontaneous and Electrically Induced Anisotropy of Composite Agarose Gels.
Zhivkov AM, Hristova SH. Zhivkov AM, et al. Gels. 2022 Nov 21;8(11):753. doi: 10.3390/gels8110753. Gels. 2022. PMID: 36421575 Free PMC article.
Publication types
MeSH terms
Substances
LinkOut - more resources
Full Text Sources