Structure of the Saccharomyces cerevisiae URA4 gene encoding dihydroorotase - PubMed
. 1988 Apr;212(1):134-41.
doi: 10.1007/BF00322456.
Affiliations
- PMID: 2897615
- DOI: 10.1007/BF00322456
Structure of the Saccharomyces cerevisiae URA4 gene encoding dihydroorotase
A Guyonvarch et al. Mol Gen Genet. 1988 Apr.
Abstract
The URA4 gene of Saccharomyces cerevisiae, coding for the third enzyme of the pyrimidine pathway, has been cloned through phenotypic complementation of a ura4 mutant of S. cerevisiae. Subcloning of an original 9 kb DNA fragment, carrying the yeast URA4 gene, allowed us to localize the gene on a 2 kb ClaI--BamHI fragment. The sequence of the URA4 structural gene and surrounding DNA was determined by the dideoxynucleotide chain termination method. The URA4 gene encodes a dihydroorotase subunit of calculated molecular weight 40,600. S1 nuclease mapping indicated that transcription of URA4 is initiated at four major start sites located at positions -41, -30, -22 and -18. A set of potentially significant sequences was identified in the 5' OH non-coding region of the gene. The deduced amino acid sequence of dihydroorotase was examined and compared with homologous amino acid sequences of Salmonella typhimurium, Escherichia coli and Drosophila melanogaster. S. cerevisiae dihydroorotase shows 40% homology with the S. typhimurium and E. coli enzymes and 23% homology with the D. melanogaster enzyme. A potential active site has been predicted for dihydroorotase from these comparisons.
Similar articles
-
Neuhard J, Kelln RA, Stauning E. Neuhard J, et al. Eur J Biochem. 1986 Jun 2;157(2):335-42. doi: 10.1111/j.1432-1033.1986.tb09673.x. Eur J Biochem. 1986. PMID: 2872051
-
Complete sequence of a eukaryotic regulatory gene.
Hubert JC, Guyonvarch A, Kammerer B, Exinger F, Liljelund P, Lacroute F. Hubert JC, et al. EMBO J. 1983;2(11):2071-3. doi: 10.1002/j.1460-2075.1983.tb01702.x. EMBO J. 1983. PMID: 6139279 Free PMC article.
-
The rudimentary gene of Drosophila melanogaster encodes four enzymic functions.
Freund JN, Jarry BP. Freund JN, et al. J Mol Biol. 1987 Jan 5;193(1):1-13. doi: 10.1016/0022-2836(87)90621-8. J Mol Biol. 1987. PMID: 2884325
-
Nucleotide sequence of the structural gene for dihydroorotase of Escherichia coli K12.
Bäckström D, Sjöberg RM, Lundberg LG. Bäckström D, et al. Eur J Biochem. 1986 Oct 1;160(1):77-82. doi: 10.1111/j.1432-1033.1986.tb09942.x. Eur J Biochem. 1986. PMID: 2876892
-
Cloning of the PYR3 gene of Ustilago maydis and its use in DNA transformation.
Banks GR, Taylor SY. Banks GR, et al. Mol Cell Biol. 1988 Dec;8(12):5417-24. doi: 10.1128/mcb.8.12.5417-5424.1988. Mol Cell Biol. 1988. PMID: 2907604 Free PMC article.
Cited by
-
de Gontijo FA, Pascon RC, Fernandes L, Machado J Jr, Alspaugh JA, Vallim MA. de Gontijo FA, et al. Fungal Genet Biol. 2014 Sep;70:12-23. doi: 10.1016/j.fgb.2014.06.003. Epub 2014 Jul 7. Fungal Genet Biol. 2014. PMID: 25011011 Free PMC article.
-
Characterizing selective pressures on the pathway for de novo biosynthesis of pyrimidines in yeast.
Hermansen RA, Mannakee BK, Knecht W, Liberles DA, Gutenkunst RN. Hermansen RA, et al. BMC Evol Biol. 2015 Oct 28;15:232. doi: 10.1186/s12862-015-0515-x. BMC Evol Biol. 2015. PMID: 26511837 Free PMC article.
-
Guan HH, Huang YH, Lin ES, Chen CJ, Huang CY. Guan HH, et al. Int J Mol Sci. 2021 Jun 25;22(13):6861. doi: 10.3390/ijms22136861. Int J Mol Sci. 2021. PMID: 34202294 Free PMC article.
-
Purine and pyrimidine nucleotide synthesis and metabolism.
Moffatt BA, Ashihara H. Moffatt BA, et al. Arabidopsis Book. 2002;1:e0018. doi: 10.1199/tab.0018. Epub 2002 Apr 4. Arabidopsis Book. 2002. PMID: 22303196 Free PMC article. No abstract available.
-
Regulation of amino acid, nucleotide, and phosphate metabolism in Saccharomyces cerevisiae.
Ljungdahl PO, Daignan-Fornier B. Ljungdahl PO, et al. Genetics. 2012 Mar;190(3):885-929. doi: 10.1534/genetics.111.133306. Genetics. 2012. PMID: 22419079 Free PMC article.
References
Publication types
MeSH terms
Substances
LinkOut - more resources
Full Text Sources
Medical
Molecular Biology Databases