pubmed.ncbi.nlm.nih.gov

Phylogenetic analysis and forensic evaluation among Rakhine, Marma, Hajong, and Manipuri tribes from four culturally defined regions of Bangladesh using 17 Y-chromosomal STRs - PubMed

. 2018 Nov;132(6):1641-1644.

doi: 10.1007/s00414-018-1915-4. Epub 2018 Aug 24.

Affiliations

Phylogenetic analysis and forensic evaluation among Rakhine, Marma, Hajong, and Manipuri tribes from four culturally defined regions of Bangladesh using 17 Y-chromosomal STRs

Mahamud Hasan et al. Int J Legal Med. 2018 Nov.

Abstract

We have analyzed haplotypes for 17 Y chromosomal STR loci in Bangladeshi mainstream Bengali population and four largest ethnic groups inhabiting the North-Eastern and Southern region of Bangladesh using AmpFlSTR® Yfiler® PCR amplification systems. A total of 667 haplotypes from Bangladeshi Bangali, 157 from Rakhine, 144 from Marma, 112 from Hajong, and 136 from Manipuri individuals were observed with corresponding discrimination capacity (DC) of 0.973 for Bengali, 0.723 for Rakhine, 0.743 for Marma, 0.794 for Hajong, and 0.720 for Manipuri groups, respectively. In order to investigate genetic relationship and the pattern of paternal contributions of the studied population, a comparison of the studied data with the published data from Y-STR haplotype reference database (YHRD) was conducted based on analysis of molecular variance (AMOVA). Construction of neighbour-joining tree revealed that the Rakhine population lies closer to a clade consisting, Korean and Japanese population. The Hajong population showed close affinity with Riang (Tripura, India) tribe followed by Marma population. On the other hand, Manipuri group is closely related to Thai population followed by Tamil and mainstream Bengali population.

Keywords: Bangladeshi; Haplotype; Population; STR; Y-chromosome.

PubMed Disclaimer

Similar articles

References

    1. Bangladesh Bureau of Statistics. Available: http://www.bbs.gov.bd/Home.aspx . Accessed 16 Aug 2013
    1. Carlson RV, Boyd KM, Webb DJ (2004) The revision of the declaration of Helsinki: past, present and future. Br J Clin Pharmacol 57:695–713 - DOI
    1. Walsh PS, Metzger DA, Higuchi R (1991) Chelex 100 as a medium for simple extraction of DNA for PCR-based typing from forensic material. Biotechniques 10:506–518 - PubMed
    1. Mulero JJ, Chang CW, Calandro LM, Green RL, Li Y, Johnson CL, Hennessy LK (2006) Development and validation of the AmpFlSTRYfiler PCR amplification kit: a male specific, single amplification 17 Y-STR multiplex system. J Forensic Sci 51:64–75 - DOI
    1. Hasan M, Momtaz P, Hosen I, Das SA, Akhteruzzaman S (2015) Population genetics of 17 Y-chromosome STRs loci in Garo and Santal tribal populations in Bangaldesh. Int J Legal Med 129:251–252 - DOI

MeSH terms

LinkOut - more resources