Phylogenomics resolves ambiguous relationships within Aciculata (Errantia, Annelida) - PubMed
Phylogenomics resolves ambiguous relationships within Aciculata (Errantia, Annelida)
Ekin Tilic et al. Mol Phylogenet Evol. 2022 Jan.
Free article
Abstract
Aciculata (Eunicida + Phyllodocida) is among the largest clades of annelids, comprising almost half of the known diversity of all marine annelids. Despite the group's large size and biological importance, most phylogenomic studies on Annelida to date have had a limited sampling of this clade. The phylogenetic placement of many clades within Phyllodocida in particular has remained poorly understood. To resolve the relationships within Aciculata we conducted a large-scale phylogenomic analysis based on 24 transcriptomes (13 new), chosen to represent many family-ranked taxa that have never been included in a broad phylogenomic study. Our sampling also includes several enigmatic taxa with challenging phylogenetic placement, such as Histriobdella, Struwela, Lacydonia, Pilargis and the holopelagic worms Lopadorrhynchus, Travisiopsis and Tomopteris. Our robust phylogeny allows us to name and place some of these problematic clades and has significant implications on the systematics of the group. Within Eunicida we reinstate the names Eunicoidea and Oenonoidea. Within Phyllodocida we delineate Phyllodociformia, Glyceriformia, Nereidiformia, Nephtyiformia and Aphroditiformia. Phyllodociformia now includes: Lacydonia, Typhloscolecidae, Lopadorrhynchidae and Phyllodocidae. Nephtyiformia includes Nephtyidae and Pilargidae. We also broaden the delineation of Glyceriformia to include Sphaerodoridae, Tomopteridae and Glyceroidea (Glyceridae + Goniadidae). Furthermore, our study demonstrates and explores how conflicting, yet highly supported topologies can result from confounding signals in gene trees.
Keywords: Eunicida; Phyllodocida; Polychaeta; Transcriptomics.
Copyright © 2021 The Author(s). Published by Elsevier Inc. All rights reserved.
Similar articles
-
Andrade SC, Novo M, Kawauchi GY, Worsaae K, Pleijel F, Giribet G, Rouse GW. Andrade SC, et al. Mol Biol Evol. 2015 Nov;32(11):2860-75. doi: 10.1093/molbev/msv157. Epub 2015 Jul 23. Mol Biol Evol. 2015. PMID: 26205969
-
A transcriptome-based phylogeny for Polynoidae (Annelida: Aphroditiformia).
Gonzalez BC, González VL, Martínez A, Worsaae K, Osborn KJ. Gonzalez BC, et al. Mol Phylogenet Evol. 2023 Aug;185:107811. doi: 10.1016/j.ympev.2023.107811. Epub 2023 May 9. Mol Phylogenet Evol. 2023. PMID: 37169231
-
Phylogeny of Annelida (Lophotrochozoa): total-evidence analysis of morphology and six genes.
Zrzavý J, Ríha P, Piálek L, Janouskovec J. Zrzavý J, et al. BMC Evol Biol. 2009 Aug 6;9:189. doi: 10.1186/1471-2148-9-189. BMC Evol Biol. 2009. PMID: 19660115 Free PMC article.
-
Annelid phylogeny and the status of Sipuncula and Echiura.
Struck TH, Schult N, Kusen T, Hickman E, Bleidorn C, McHugh D, Halanych KM. Struck TH, et al. BMC Evol Biol. 2007 Apr 5;7:57. doi: 10.1186/1471-2148-7-57. BMC Evol Biol. 2007. PMID: 17411434 Free PMC article.
-
Worsaae K, Rouse GW. Worsaae K, et al. J Morphol. 2008 Dec;269(12):1426-55. doi: 10.1002/jmor.10686. J Morphol. 2008. PMID: 18985766 Review.
Cited by
-
Jimi N, Nakajima H, Sato T, Gonzalez BC, Woo SP, Rouse GW, Britayev T. Jimi N, et al. PeerJ. 2023 Nov 1;11:e16346. doi: 10.7717/peerj.16346. eCollection 2023. PeerJ. 2023. PMID: 37927790 Free PMC article.
-
Tilic E, Herkenrath T, Kirfel G, Bartolomaeus T. Tilic E, et al. Cell Tissue Res. 2023 Feb;391(2):305-322. doi: 10.1007/s00441-022-03731-9. Epub 2022 Dec 23. Cell Tissue Res. 2023. PMID: 36562865 Free PMC article.
-
Common origin of sterol biosynthesis points to a feeding strategy shift in Neoproterozoic animals.
Brunoir T, Mulligan C, Sistiaga A, Vuu KM, Shih PM, O'Reilly SS, Summons RE, Gold DA. Brunoir T, et al. Nat Commun. 2023 Dec 1;14(1):7941. doi: 10.1038/s41467-023-43545-z. Nat Commun. 2023. PMID: 38040676 Free PMC article.
-
CaaX-less lamins: Lophotrochozoa provide a glance at the playground of evolution.
Stick R, Peter A. Stick R, et al. Protoplasma. 2023 May;260(3):741-756. doi: 10.1007/s00709-022-01809-3. Epub 2022 Sep 14. Protoplasma. 2023. PMID: 36102949 Free PMC article.