pubmed.ncbi.nlm.nih.gov

Fine mapping of QPm.caas-3BS, a stable QTL for adult-plant resistance to powdery mildew in wheat (Triticum aestivum L.) - PubMed

Review

. 2022 Mar;135(3):1083-1099.

doi: 10.1007/s00122-021-04019-2. Epub 2022 Jan 10.

Affiliations

PMID: 35006334
DOI: 10.1007/s00122-021-04019-2

Review

Fine mapping of QPm.caas-3BS, a stable QTL for adult-plant resistance to powdery mildew in wheat (Triticum aestivum L.)

Yan Dong et al. Theor Appl Genet. 2022 Mar.

Abstract

A stable QTL QPm.caas-3BS for adult-plant resistance to powdery mildew was mapped in an interval of 431 kb, and candidate genes were predicted based on gene sequences and expression profiles. Powdery mildew is a devastating foliar disease occurring in most wheat-growing areas. Characterization and fine mapping of genes for powdery mildew resistance can benefit marker-assisted breeding. We previously identified a stable quantitative trait locus (QTL) QPm.caas-3BS for adult-plant resistance to powdery mildew in a recombinant inbred line population of Zhou8425B/Chinese Spring by phenotyping across four environments. Using 11 heterozygous recombinants and high-density molecular markers, QPm.caas-3BS was delimited in a physical interval of approximately 3.91 Mb. Based on re-sequenced data and expression profiles, three genes TraesCS3B02G014800, TraesCS3B02G016800 and TraesCS3B02G019900 were associated with the powdery mildew resistance locus. Three gene-specific kompetitive allele-specific PCR (KASP) markers were developed from these genes and validated in the Zhou8425B derivatives and Zhou8425B/Chinese Spring population in which the resistance gene was mapped to a 0.3 cM interval flanked by KASP14800 and snp_50465, corresponding to a 431 kb region at the distal end of chromosome 3BS. Within the interval, TraesCS3B02G014800 was the most likely candidate gene for QPm.caas-3BS, but TraesCS3B02G016300 and TraesCS3B02G016400 were less likely candidates based on gene annotations and sequence variation between the parents. These results not only offer high-throughput KASP markers for improvement of powdery mildew resistance but also pave the way to map-based cloning of the resistance gene.

PubMed Disclaimer

Cited by

Mapping of the novel powdery mildew resistance gene Pm2Mb from Aegilops biuncialis based on ph1b-induced homoeologous recombination.
Men W, Fan Z, Ma C, Zhao Y, Wang C, Tian X, Chen Q, Miao J, He J, Qian J, Sehgal SK, Li H, Liu W. Men W, et al. Theor Appl Genet. 2022 Sep;135(9):2993-3003. doi: 10.1007/s00122-022-04162-4. Epub 2022 Jul 13. Theor Appl Genet. 2022. PMID: 35831461
The impact of GmTSA and GmALS on soybean salt tolerance: uncovering the molecular landscape of amino acid and secondary metabolism pathways.
Sun M, Wei S, Liu J, Wang L, Zhang Y, Hu L, Piao J, Liang Z, Jiang H, Xin D, Zhao Y, Chen Q, Foyer CH, Liu C, Qi Z. Sun M, et al. Theor Appl Genet. 2023 Sep 22;136(10):212. doi: 10.1007/s00122-023-04461-4. Theor Appl Genet. 2023. PMID: 37740151
Fine-mapping of LrN3B on wheat chromosome arm 3BS, one of the two complementary genes for adult-plant leaf rust resistance.
Wang W, Li H, Qiu L, Wang H, Pan W, Yang Z, Wei W, Liu N, Sun J, Hu Z, Ma J, Ni Z, Li Y, Sun Q, Xie C. Wang W, et al. Theor Appl Genet. 2024 Aug 13;137(9):203. doi: 10.1007/s00122-024-04706-w. Theor Appl Genet. 2024. PMID: 39134836
Tae-miR397 Negatively Regulates Wheat Resistance to Blumeria graminis.
Guan Y, Wei Z, Zhou L, Wang K, Zhang M, Song P, Hu P, Hu H, Li C. Guan Y, et al. Plants (Basel). 2023 Aug 29;12(17):3096. doi: 10.3390/plants12173096. Plants (Basel). 2023. PMID: 37687344 Free PMC article.
High-density mapping of durable and broad-spectrum stripe rust resistance gene Yr30 in wheat.
Wang X, Xiang M, Li H, Li X, Mu K, Huang S, Zhang Y, Cheng X, Yang S, Yuan X, Singh RP, Bhavani S, Zeng Q, Wu J, Kang Z, Liu S, Han D. Wang X, et al. Theor Appl Genet. 2024 Jun 8;137(7):152. doi: 10.1007/s00122-024-04654-5. Theor Appl Genet. 2024. PMID: 38850423

References

1. Ashikari M, Sakakibara H, Lin SY, Yamamoto T, Takashi T, Nishimura A, Angeles ER, Qian Q, Kitano H, Matsuoka M (2005) Cytokinin oxidase regulates rice grain production. Science 309:741–745. https://doi.org/10.1126/science.1113373 - DOI - PubMed
1. Avni R, Nave M, Barad O, Baruch K, Twardziok SO, Gundlach H, Hale I, Mascher M, Spannagl M, Wiebe K, Jordan KW, Golan G, Deek J, Ben-Zvi B, Ben-Zvi G, Himmelbach A, MacLachlan RP, Sharpe AG, Fritz A, Ben-David R, Budak H, Fahima T, Korol A, Faris JD, Hernandez A, Mikel MA, Levy AA, Steffenson B, Maccaferri M, Tuberosa R, Cattivelli L, Faccioli P, Ceriotti A, Kashkush K, Pourkheirandish M, Komatsuda T, Eilam T, Sela H, Sharon A, Ohad N, Chamovitz DA, Mayer KFX, Stein N, Ronen G, Peleg Z, Pozniak CJ, Akhunov ED, Distelfeld A (2017) Wild emmer genome architecture and diversity elucidate wheat evolution and domestication. Science 357:93–97. https://doi.org/10.1126/science.aan0032 - DOI - PubMed
1. Bent AF, Mackey D (2007) Elicitors, effectors, and R genes: the new paradigm and a lifetime supply of questions. Annu Rev Phytopathol 45:399–436. https://doi.org/10.1146/annurev.phyto.45.062806.094427 - DOI - PubMed
1. Boni R, Chauhan H, Hensel G, Roulin A, Sucher J, Kumlehn J, Brunner S, Krattinger SG, Keller B (2018) Pathogen-inducible Ta-Lr34res expression in heterologous barley confers disease resistance without negative pleiotropic effects. Plant Biotechnol J 16:245–253. https://doi.org/10.1111/pbi.12765 - DOI - PubMed
1. Brenchley R, Spannagl M, Pfeifer M, Barker GL, D’Amore R, Allen AM, McKenzie N, Kramer M, Kerhornou A, Bolser D, Kay S, Waite D, Trick M, Bancroft I, Gu Y, Huo NX, Luo MC, Sehgal S, Gill B, Kianian S, Anderson O, Kersey P, Dvorak J, McCombie WR, Hall A, Mayer KFX, Edwards KJ, Bevan MW, Hall N (2012) Analysis of the bread wheat genome using whole-genome shot gun sequencing. Nature 491:705–710. https://doi.org/10.1038/nature11650 - DOI - PubMed - PMC

Publication types

MeSH terms

LinkOut - more resources

Full Text Sources
- Springer
Miscellaneous
- NCI CPTAC Assay Portal