Crystal structure of oxygen-evolving photosystem II at a resolution of 1.9 Å - PubMed
- ️Sat Jan 01 2011
. 2011 May 5;473(7345):55-60.
doi: 10.1038/nature09913. Epub 2011 Apr 17.
Affiliations
- PMID: 21499260
- DOI: 10.1038/nature09913
Free article
Crystal structure of oxygen-evolving photosystem II at a resolution of 1.9 Å
Yasufumi Umena et al. Nature. 2011.
Free article
Abstract
Photosystem II is the site of photosynthetic water oxidation and contains 20 subunits with a total molecular mass of 350 kDa. The structure of photosystem II has been reported at resolutions from 3.8 to 2.9 Å. These resolutions have provided much information on the arrangement of protein subunits and cofactors but are insufficient to reveal the detailed structure of the catalytic centre of water splitting. Here we report the crystal structure of photosystem II at a resolution of 1.9 Å. From our electron density map, we located all of the metal atoms of the Mn(4)CaO(5) cluster, together with all of their ligands. We found that five oxygen atoms served as oxo bridges linking the five metal atoms, and that four water molecules were bound to the Mn(4)CaO(5) cluster; some of them may therefore serve as substrates for dioxygen formation. We identified more than 1,300 water molecules in each photosystem II monomer. Some of them formed extensive hydrogen-bonding networks that may serve as channels for protons, water or oxygen molecules. The determination of the high-resolution structure of photosystem II will allow us to analyse and understand its functions in great detail.
©2011 Macmillan Publishers Limited. All rights reserved
Similar articles
-
Architecture of the photosynthetic oxygen-evolving center.
Ferreira KN, Iverson TM, Maghlaoui K, Barber J, Iwata S. Ferreira KN, et al. Science. 2004 Mar 19;303(5665):1831-8. doi: 10.1126/science.1093087. Epub 2004 Feb 5. Science. 2004. PMID: 14764885
-
Guskov A, Kern J, Gabdulkhakov A, Broser M, Zouni A, Saenger W. Guskov A, et al. Nat Struct Mol Biol. 2009 Mar;16(3):334-42. doi: 10.1038/nsmb.1559. Epub 2009 Feb 15. Nat Struct Mol Biol. 2009. PMID: 19219048
-
Structure of the catalytic, inorganic core of oxygen-evolving photosystem II at 1.9 Å resolution.
Kawakami K, Umena Y, Kamiya N, Shen JR. Kawakami K, et al. J Photochem Photobiol B. 2011 Jul-Aug;104(1-2):9-18. doi: 10.1016/j.jphotobiol.2011.03.017. Epub 2011 Apr 15. J Photochem Photobiol B. 2011. PMID: 21543235 Review.
-
Towards complete cofactor arrangement in the 3.0 A resolution structure of photosystem II.
Loll B, Kern J, Saenger W, Zouni A, Biesiadka J. Loll B, et al. Nature. 2005 Dec 15;438(7070):1040-4. doi: 10.1038/nature04224. Nature. 2005. PMID: 16355230
-
Recent progress in the crystallographic studies of photosystem II.
Guskov A, Gabdulkhakov A, Broser M, Glöckner C, Hellmich J, Kern J, Frank J, Müh F, Saenger W, Zouni A. Guskov A, et al. Chemphyschem. 2010 Apr 26;11(6):1160-71. doi: 10.1002/cphc.200900901. Chemphyschem. 2010. PMID: 20352642 Review.
Cited by
-
Structural, functional and auxiliary proteins of photosystem II.
Pagliano C, Saracco G, Barber J. Pagliano C, et al. Photosynth Res. 2013 Oct;116(2-3):167-88. doi: 10.1007/s11120-013-9803-8. Epub 2013 Feb 17. Photosynth Res. 2013. PMID: 23417641 Review.
-
Structure of cyanobacterial photosystem I complexed with ferredoxin at 1.97 Å resolution.
Li J, Hamaoka N, Makino F, Kawamoto A, Lin Y, Rögner M, Nowaczyk MM, Lee YH, Namba K, Gerle C, Kurisu G. Li J, et al. Commun Biol. 2022 Sep 12;5(1):951. doi: 10.1038/s42003-022-03926-4. Commun Biol. 2022. PMID: 36097054 Free PMC article.
-
Rate law analysis of water oxidation on a hematite surface.
Le Formal F, Pastor E, Tilley SD, Mesa CA, Pendlebury SR, Grätzel M, Durrant JR. Le Formal F, et al. J Am Chem Soc. 2015 May 27;137(20):6629-37. doi: 10.1021/jacs.5b02576. Epub 2015 May 15. J Am Chem Soc. 2015. PMID: 25936408 Free PMC article.
-
Insights from Ca2+→Sr2+ substitution on the mechanism of O-O bond formation in photosystem II.
Bury G, Pushkar Y. Bury G, et al. Photosynth Res. 2024 Dec;162(2-3):331-351. doi: 10.1007/s11120-024-01117-2. Epub 2024 Aug 26. Photosynth Res. 2024. PMID: 39186214 Review.
-
Norena-Caro DA, Malone TM, Benton MG. Norena-Caro DA, et al. Microorganisms. 2021 Feb 19;9(2):431. doi: 10.3390/microorganisms9020431. Microorganisms. 2021. PMID: 33669780 Free PMC article.
References
-
- Acta Crystallogr D Biol Crystallogr. 1994 Sep 1;50(Pt 5):760-3 - PubMed
-
- Acta Crystallogr D Biol Crystallogr. 1999 Mar;55(Pt 3):583-601 - PubMed
-
- Proc Natl Acad Sci U S A. 2005 Aug 23;102(34):12047-52 - PubMed
-
- J Struct Biol. 2007 Aug;159(2):228-37 - PubMed
-
- Philos Trans R Soc Lond B Biol Sci. 2008 Mar 27;363(1494):1167-77; discussion 1177 - PubMed
Publication types
MeSH terms
Substances
LinkOut - more resources
Full Text Sources
Other Literature Sources
Molecular Biology Databases