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RCSB PDB - 2C0T: Src family kinase Hck with bound inhibitor A-641359

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Src family kinase Hck with bound inhibitor A-641359




    This is version 1.5 of the entry. See complete history



    Discovery of A-770041, a Src-Family Selective Orally Active Lck Inhibitor that Prevents Organ Allograft Rejection.

    Burchat, A.Borhani, D.W.Calderwood, D.J.Hirst, G.C.Li, B.Stachlewitz, R.F.

    (2006) Bioorg Med Chem Lett 16: 118

    • PubMed16216497 Search on PubMed
    • DOI: https://doi.org/10.1016/j.bmcl.2005.09.039

    • PubMed Abstract: 

      We describe the identification, SAR, and pharmacology of the src-family selective lck inhibitor A-770041 that prolongs the survival of major histocompatibility mismatched allografts in models of solid organ transplant rejection for greater than 65 days.


    • Organizational Affiliation

      Abbott Bioresearch Center, 100 Research Drive, Worcester, MA 01605-5314, USA.

    Macromolecule Content

    • Total Structure Weight: 105.32 kDa 
    • Atom Count: 7,225 
    • Modelled Residue Count: 858 
    • Deposited Residue Count: 908 
    • Unique protein chains: 1

    Find similar proteins by:

    (by identity cutoff)  |  3D Structure

    Modified Residues  1 Unique
    IDChains TypeFormula2D DiagramParent
    PTR
    Query on PTR

    A, B

    L-PEPTIDE LINKINGC9 H12 N O6 PTYR

    Experimental Data & Validation

    Experimental Data

    • Method: X-RAY DIFFRACTION
    • Resolution: 2.15 Å
    • R-Value Free:  0.253 (Depositor), 0.260 (DCC) 
    • R-Value Work:  0.194 (Depositor), 0.200 (DCC) 
    • R-Value Observed: 0.197 (Depositor) 

    Unit Cell:

    Length ( Å )Angle ( ˚ )
    a = 48.861α = 90
    b = 72.909β = 95.87
    c = 180.002γ = 90

    Software Package:

    Software NamePurpose
    REFMACrefinement
    HKL-2000data reduction
    SCALEPACKdata scaling
    AMoREphasing

    Deposition Data

    Revision History  (Full details and data files)

    • Version 1.0: 2006-09-20
      Type: Initial release
    • Version 1.1: 2011-07-13
      Changes: Advisory, Version format compliance
    • Version 1.2: 2019-03-06
      Changes: Data collection, Derived calculations, Experimental preparation, Other
    • Version 1.3: 2019-05-08
      Changes: Data collection, Experimental preparation
    • Version 1.4: 2023-12-13
      Changes: Data collection, Database references, Derived calculations, Other, Refinement description
    • Version 1.5: 2024-10-16
      Changes: Structure summary